SCOPe 2.05: Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain

Lineage for Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
   multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies

4. Superfamily a.102.3: Chondroitin AC/alginate lyase [48230] (2 families)
   incomplete toroid

5. Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain [48234] (5 proteins)

Proteins:

1. Chondroitin ABC lyase I [89113] (1 species)
   domain 2; preceded by a beta-domain of the galactose-binding domain-like fold

   • Species Proteus vulgaris [TaxId:585] [89114] (1 PDB entry)

2. Chondroitinase AC [48235] (2 species)
   Chondroitin AC lyase

   1. Species Arthrobacter aurescens [TaxId:43663] [101368] (6 PDB entries)

   2. Species Pedobacter heparinus (Flavobacterium heparinum) [TaxId:984] [48236] (5 PDB entries)

3. Hyaluronate lyase [48237] (2 species)

   1. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [48238] (18 PDB entries)
      Uniprot Q54873 287-1007

   2. Species Streptococcus agalactiae [TaxId:1311] [69089] (3 PDB entries)
      preceded by a small all-beta Ig-like domain

4. Xanthan lyase [89111] (1 species)

   • Species Bacillus sp. GL1 [TaxId:84635] [89112] (2 PDB entries)

5. automated matches [254448] (1 species)
   not a true protein

   • Species Bacillus sp. [TaxId:84635] [254958] (5 PDB entries)

More info for Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain

Timeline for Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain:

• Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Family a.102.3.2: Hyaluronate lyase-like, N-terminal domain
  
• Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain appears in SCOPe 2.04
  
• Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain appears in SCOPe 2.06
  
• Family a.102.3.2: Hyaluronate lyase-like catalytic, N-terminal domain appears in the current release, SCOPe 2.08