SCOPe 2.08: Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain

Lineage for Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.60: SAM domain-like [47768] (17 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.7: 5' to 3' exonuclease, C-terminal subdomain [47807] (2 families)

5. Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain [47808] (4 proteins)

Proteins:

1. 5' to 3' exonuclease domain of DNA polymerase Taq [47811] (1 species)

   • Species Thermus aquaticus [TaxId:271] [47812] (4 PDB entries)

2. Flap endonuclease-1 (Fen-1 nuclease) [47815] (5 species)

   1. Species Archaeoglobus fulgidus [TaxId:2234] [101255] (2 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [140638] (1 PDB entry)
      Uniprot P39748 218-357

   3. Species Methanococcus jannaschii [TaxId:2190] [47816] (2 PDB entries)

   4. Species Pyrococcus furiosus [TaxId:2261] [47818] (1 PDB entry)

   5. Species Pyrococcus horikoshii [TaxId:53953] [81798] (1 PDB entry)

3. T4 RNase H [47809] (1 species)

   • Species Bacteriophage T4 [TaxId:10665] [47810] (6 PDB entries)

4. T5 5'-exonuclease [47813] (1 species)

   • Species Bacteriophage T5 [TaxId:10726] [47814] (6 PDB entries)

More info for Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain

Timeline for Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain:

• Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain first appeared (with stable ids) in SCOP 1.55
  
• Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain appears in SCOPe 2.07