Lineage for Species: Thermus filiformis

  1. Root: SCOP 1.65
  2. 275720Class a: All alpha proteins [46456] (179 folds)
  3. 282277Fold a.60: SAM domain-like [47768] (13 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 282321Superfamily a.60.2: RuvA domain 2-like [47781] (3 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 282346Family a.60.2.2: NAD+-dependent DNA ligase, domain 3 [47786] (1 protein)
  6. 282347Protein NAD+-dependent DNA ligase, domain 3 [47787] (1 species)
    duplication: consists of two RuvA-like domains (four HhH motifs); also contains a zinc-finger subdomain
  7. 282348Species Thermus filiformis [TaxId:276] [47788] (2 PDB entries)

PDB entries in Species: Thermus filiformis:

  1. Domain(s) for 1dgs:
    1. 282349Domain d1dgsa1: 1dgs A:401-581 [17963]
      Other proteins in same PDB: d1dgsa2, d1dgsa3, d1dgsb2, d1dgsb3
    2. 282350Domain d1dgsb1: 1dgs B:2401-2581 [17964]
      Other proteins in same PDB: d1dgsa2, d1dgsa3, d1dgsb2, d1dgsb3
      complexed with amp, zn
  2. Domain(s) for 1dgt:
    1. 282351Domain d1dgta1: 1dgt A:401-581 [17965]
      Other proteins in same PDB: d1dgta2, d1dgta3, d1dgtb2, d1dgtb3, d1dgtb4
    2. 282352Domain d1dgtb1: 1dgt B:2401-2581 [17966]
      Other proteins in same PDB: d1dgta2, d1dgta3, d1dgtb2, d1dgtb3, d1dgtb4
      complexed with amp, zn

More info for Species Thermus filiformis [TaxId:276] from a.60.2.2 NAD+-dependent DNA ligase, domain 3

Timeline for Species Thermus filiformis [TaxId:276] from a.60.2.2 NAD+-dependent DNA ligase, domain 3: