SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family a.47.2.1: t-snare proteins

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1997864Fold a.47: STAT-like [47654] (6 superfamilies)
    4 long helices; bundle, left-handed twist (coiled coil); right-handed superhelix
  4. 1997877Superfamily a.47.2: t-snare proteins [47661] (1 family) (S)
  5. 1997878Family a.47.2.1: t-snare proteins [47662] (6 protein domains)

Protein Domains:

  1. 1997879Sso1 [47665] (1 species)
  2. 1997882Syntaxin 1A N-terminal domain [47663] (2 species)
    1. 1997883Species Longfin inshore squid (Loligo pealei) [TaxId:6621] [101222] (1 PDB entry)
    2. 1997886Species Norway rat (Rattus norvegicus) [TaxId:10116] [47664] (3 PDB entries)
  3. 1997892Syntaxin 6, SNAP-25 homolog [74727] (1 species)
  4. 1997896Vam3p N-terminal domain [63559] (1 species)
  5. 1997899Vesicle transport v-SNARE protein Vti1-like 2 [140564] (1 species)
    three-helical fragment similar to spectrin repeat
  6. 1997902automated matches [191190] (4 species)
    not a true protein
    1. 1997903Species Artificial gene [TaxId:32630] [189472] (1 PDB entry)
    2. 1997907Species Human (Homo sapiens) [TaxId:9606] [226308] (1 PDB entry)
    3. 1997909Species Rattus norvegicus [311131] (1 PDB entry)
    4. 2286207Species Saccharomyces cerevisiae [TaxId:559292] [329508] (2 PDB entries)

More info for Family a.47.2.1: t-snare proteins

Timeline for Family a.47.2.1: t-snare proteins: