SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family a.24.3.2: Cytochrome c'-like

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1987359Fold a.24: Four-helical up-and-down bundle [47161] (28 superfamilies)
    core: 4 helices; bundle, closed or partly opened, left-handed twist; up-and-down
  4. 1987402Superfamily a.24.3: Cytochromes [47175] (3 families) (S)
    Heme-containing proteins
  5. 1987554Family a.24.3.2: Cytochrome c'-like [47179] (3 protein domains)
    automatically mapped to Pfam PF01322

Protein Domains:

  1. 1987555Cytochrome c' [47180] (9 species)
    1. 1987556Species Alcaligenes denitrificans [TaxId:32002] [47183] (1 PDB entry)
    2. 1987558Species Alcaligenes sp. [TaxId:512] [47184] (13 PDB entries)
    3. 1987572Species Chromatium vinosum [TaxId:1049] [47182] (1 PDB entry)
    4. 1987575Species Rhodobacter capsulatus [TaxId:1061] [47186] (4 PDB entries)
    5. 1987582Species Rhodobacter sphaeroides [TaxId:1063] [81734] (1 PDB entry)
    6. 1987585Species Rhodocyclus gelatinosus [TaxId:28068] [47185] (1 PDB entry)
    7. 1987588Species Rhodopseudomonas palustris [TaxId:1076] [47187] (2 PDB entries)
    8. 1987593Species Rhodospirillum molischianum [TaxId:1083] [47181] (1 PDB entry)
    9. 2286118Species Allochromatium vinosum [TaxId:572477] [329419] (1 PDB entry)
  2. 1987596Cytochrome c-556 [101109] (1 species)
  3. 1987599automated matches [190363] (5 species)
    not a true protein
    1. 1987600Species Achromobacter xylosoxidans [TaxId:85698] [189489] (28 PDB entries)
    2. 1987628Species Rhodocyclus gelatinosus [TaxId:28068] [187197] (1 PDB entry)
    3. 1987631Species Rubrivivax gelatinosus [TaxId:28068] [187196] (1 PDB entry)
    4. 1987634Species Thermochromatium tepidum [TaxId:1050] [194692] (1 PDB entry)
    5. 2287374Species Alcaligenes xylosoxydans [TaxId:85698] [330675] (7 PDB entries)

More info for Family a.24.3.2: Cytochrome c'-like

Timeline for Family a.24.3.2: Cytochrome c'-like: