SCOPe 2.06: Species: Methylococcus capsulatus [TaxId: 414]

Lineage for Species: Methylococcus capsulatus [TaxId: 414]

Root: SCOPe 2.06
Class a: All alpha proteins [46456] (289 folds)
Fold a.23: Open three-helical up-and-down bundle [47143] (7 superfamilies)
core: 3 helices; bundle, open
Superfamily a.23.3: Methane monooxygenase hydrolase, gamma subunit [47152] (1 family)
duplication: consists of two domains of this fold
automatically mapped to Pfam PF02964
Family a.23.3.1: Methane monooxygenase hydrolase, gamma subunit [47153] (1 protein)
Protein Methane monooxygenase hydrolase, gamma subunit [47154] (2 species)
Species Methylococcus capsulatus [TaxId:414] [47155] (27 PDB entries)

PDB entries in Species: Methylococcus capsulatus [TaxId: 414]:

Domain(s) for 1fyz:
1. Domain d1fyze_: 1fyz E: [16508]
  Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyzc_, d1fyzd_
  complexed with ca, fe2
2. Domain d1fyzf_: 1fyz F: [16509]
  Other proteins in same PDB: d1fyza_, d1fyzb_, d1fyzc_, d1fyzd_
  complexed with ca, fe2
Domain(s) for 1fz0:
1. Domain d1fz0e_: 1fz0 E: [16506]
  Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0c_, d1fz0d_
  complexed with ca, fe2
2. Domain d1fz0f_: 1fz0 F: [16507]
  Other proteins in same PDB: d1fz0a_, d1fz0b_, d1fz0c_, d1fz0d_
  complexed with ca, fe2
Domain(s) for 1fz1:
1. Domain d1fz1e_: 1fz1 E: [16500]
  Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1c_, d1fz1d_
  complexed with ca, fe, fmt
2. Domain d1fz1f_: 1fz1 F: [16501]
  Other proteins in same PDB: d1fz1a_, d1fz1b_, d1fz1c_, d1fz1d_
  complexed with ca, fe, fmt
Domain(s) for 1fz2:
1. Domain d1fz2e_: 1fz2 E: [16510]
  Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2c_, d1fz2d_
  complexed with ca, fe2
2. Domain d1fz2f_: 1fz2 F: [16511]
  Other proteins in same PDB: d1fz2a_, d1fz2b_, d1fz2c_, d1fz2d_
  complexed with ca, fe2
Domain(s) for 1fz3:
1. Domain d1fz3e_: 1fz3 E: [16502]
  Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3c_, d1fz3d_
  complexed with ca, fe, fmt
2. Domain d1fz3f_: 1fz3 F: [16503]
  Other proteins in same PDB: d1fz3a_, d1fz3b_, d1fz3c_, d1fz3d_
  complexed with ca, fe, fmt
Domain(s) for 1fz4:
1. Domain d1fz4e_: 1fz4 E: [16514]
  Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4c_, d1fz4d_
  complexed with ca, fe, fmt
2. Domain d1fz4f_: 1fz4 F: [16515]
  Other proteins in same PDB: d1fz4a_, d1fz4b_, d1fz4c_, d1fz4d_
  complexed with ca, fe, fmt
Domain(s) for 1fz5:
1. Domain d1fz5e_: 1fz5 E: [16516]
  Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5c_, d1fz5d_
  complexed with ca, fe2
2. Domain d1fz5f_: 1fz5 F: [16517]
  Other proteins in same PDB: d1fz5a_, d1fz5b_, d1fz5c_, d1fz5d_
  complexed with ca, fe2
Domain(s) for 1fz6:
1. Domain d1fz6e_: 1fz6 E: [60120]
  Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6c_, d1fz6d_
  complexed with ca, fe, moh
2. Domain d1fz6f_: 1fz6 F: [60121]
  Other proteins in same PDB: d1fz6a_, d1fz6b_, d1fz6c_, d1fz6d_
  complexed with ca, fe, moh
Domain(s) for 1fz7:
1. Domain d1fz7e_: 1fz7 E: [16504]
  Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7c_, d1fz7d_
  complexed with ca, eoh, fe, fmt
2. Domain d1fz7f_: 1fz7 F: [16505]
  Other proteins in same PDB: d1fz7a_, d1fz7b_, d1fz7c_, d1fz7d_
  complexed with ca, eoh, fe, fmt
Domain(s) for 1fz8:
1. Domain d1fz8e_: 1fz8 E: [60126]
  Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8c_, d1fz8d_
  complexed with 2bm, ca, fe
2. Domain d1fz8f_: 1fz8 F: [60127]
  Other proteins in same PDB: d1fz8a_, d1fz8b_, d1fz8c_, d1fz8d_
  complexed with 2bm, ca, fe
Domain(s) for 1fz9:
1. Domain d1fz9e_: 1fz9 E: [60132]
  Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9c_, d1fz9d_
  complexed with ca, eti, fe
2. Domain d1fz9f_: 1fz9 F: [60133]
  Other proteins in same PDB: d1fz9a_, d1fz9b_, d1fz9c_, d1fz9d_
  complexed with ca, eti, fe
Domain(s) for 1fzh:
1. Domain d1fzhe_: 1fzh E: [60138]
  Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhc_, d1fzhd_
  complexed with ca, fe, xe
2. Domain d1fzhf_: 1fzh F: [60139]
  Other proteins in same PDB: d1fzha_, d1fzhb_, d1fzhc_, d1fzhd_
  complexed with ca, fe, xe
Domain(s) for 1fzi:
1. Domain d1fzie_: 1fzi E: [60144]
  Other proteins in same PDB: d1fzia_, d1fzib_, d1fzic_, d1fzid_
  complexed with fe, xe
2. Domain d1fzif_: 1fzi F: [60145]
  Other proteins in same PDB: d1fzia_, d1fzib_, d1fzic_, d1fzid_
  complexed with fe, xe
Domain(s) for 1mmo:
1. Domain d1mmog_: 1mmo G: [16512]
  Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmod_, d1mmoe_
  complexed with acy, fe
2. Domain d1mmoh_: 1mmo H: [16513]
  Other proteins in same PDB: d1mmob_, d1mmoc_, d1mmod_, d1mmoe_
  complexed with acy, fe
Domain(s) for 1mty:
1. Domain d1mtyg_: 1mty G: [16498]
  Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyd_, d1mtye_
  complexed with fe
2. Domain d1mtyh_: 1mty H: [16499]
  Other proteins in same PDB: d1mtyb_, d1mtyc_, d1mtyd_, d1mtye_
  complexed with fe
Domain(s) for 1xmf:
1. Domain d1xmfe_: 1xmf E: [122151]
  Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfc1, d1xmfd_
  automated match to d1fyzf_
  complexed with ca, mn
2. Domain d1xmff_: 1xmf F: [122152]
  Other proteins in same PDB: d1xmfa_, d1xmfb_, d1xmfc1, d1xmfd_
  automated match to d1fyzf_
  complexed with ca, mn
Domain(s) for 1xmg:
1. Domain d1xmge_: 1xmg E: [122157]
  Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmgc_, d1xmgd_
  automated match to d1fyzf_
  complexed with ca
2. Domain d1xmgf_: 1xmg F: [122158]
  Other proteins in same PDB: d1xmga_, d1xmgb_, d1xmgc_, d1xmgd_
  automated match to d1fyzf_
  complexed with ca
Domain(s) for 1xmh:
1. Domain d1xmhe_: 1xmh E: [122163]
  Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhc_, d1xmhd_
  automated match to d1fyzf_
  complexed with co
2. Domain d1xmhf_: 1xmh F: [122164]
  Other proteins in same PDB: d1xmha_, d1xmhb_, d1xmhc_, d1xmhd_
  automated match to d1fyzf_
  complexed with co
Domain(s) for 1xu3:
1. Domain d1xu3e_: 1xu3 E: [122324]
  Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3c_, d1xu3d_
  automated match to d1fyzf_
  complexed with bml, fe
2. Domain d1xu3f_: 1xu3 F: [122325]
  Other proteins in same PDB: d1xu3a_, d1xu3b_, d1xu3c_, d1xu3d_
  automated match to d1fyzf_
  complexed with bml, fe
Domain(s) for 1xu5:
1. Domain d1xu5e_: 1xu5 E: [122330]
  Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5c_, d1xu5d_
  automated match to d1fyzf_
  complexed with fe, iph, oh
2. Domain d1xu5f_: 1xu5 F: [122331]
  Other proteins in same PDB: d1xu5a_, d1xu5b_, d1xu5c_, d1xu5d_
  automated match to d1fyzf_
  complexed with fe, iph, oh
Domain(s) for 1xvb:
1. Domain d1xvbe_: 1xvb E: [122348]
  Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbc_, d1xvbd_
  automated match to d1fyzf_
  complexed with 3br, bbu, bbx, bhl, ca, fe
2. Domain d1xvbf_: 1xvb F: [122349]
  Other proteins in same PDB: d1xvba_, d1xvbb_, d1xvbc_, d1xvbd_
  automated match to d1fyzf_
  complexed with 3br, bbu, bbx, bhl, ca, fe
Domain(s) for 1xvc:
1. Domain d1xvce_: 1xvc E: [122354]
  Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvcc_, d1xvcd_
  automated match to d1fyzf_
  complexed with 5br, bmm, br, fe, fmt
2. Domain d1xvcf_: 1xvc F: [122355]
  Other proteins in same PDB: d1xvca_, d1xvcb_, d1xvcc_, d1xvcd_
  automated match to d1fyzf_
  complexed with 5br, bmm, br, fe, fmt
Domain(s) for 1xvd:
1. Domain d1xvde_: 1xvd E: [122360]
  Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvdc_, d1xvdd_
  automated match to d1fyzf_
  complexed with fe, fpn
2. Domain d1xvdf_: 1xvd F: [122361]
  Other proteins in same PDB: d1xvda_, d1xvdb_, d1xvdc_, d1xvdd_
  automated match to d1fyzf_
  complexed with fe, fpn
Domain(s) for 1xve:
1. Domain d1xvee_: 1xve E: [122366]
  Other proteins in same PDB: d1xvea_, d1xveb_, d1xvec_, d1xved_
  automated match to d1fyzf_
  complexed with 3bb, ca, fe
2. Domain d1xvef_: 1xve F: [122367]
  Other proteins in same PDB: d1xvea_, d1xveb_, d1xvec_, d1xved_
  automated match to d1fyzf_
  complexed with 3bb, ca, fe
Domain(s) for 1xvf:
1. Domain d1xvfe_: 1xvf E: [122372]
  Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfc_, d1xvfd_
  automated match to d1fyzf_
  complexed with 3cl, fe
2. Domain d1xvff_: 1xvf F: [122373]
  Other proteins in same PDB: d1xvfa_, d1xvfb_, d1xvfc_, d1xvfd_
  automated match to d1fyzf_
  complexed with 3cl, fe
Domain(s) for 1xvg:
1. Domain d1xvge_: 1xvg E: [122378]
  Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvgc_, d1xvgd_
  automated match to d1fyzf_
  complexed with brj, ca, fe
2. Domain d1xvgf_: 1xvg F: [122379]
  Other proteins in same PDB: d1xvga_, d1xvgb_, d1xvgc_, d1xvgd_
  automated match to d1fyzf_
  complexed with brj, ca, fe

Domain(s) for 4gam:

Domain d4gamc_: 4gam C: [202224]
Other proteins in same PDB: d4gama_, d4gamb_, d4gamd_, d4gamf_, d4gamg_, d4gami_, d4gamk_, d4gaml_, d4gamn_, d4gamp_, d4gamq_, d4gams_
automated match to d1fz1e_
complexed with fe

Domain d4gamh_: 4gam H: [202228]
Other proteins in same PDB: d4gama_, d4gamb_, d4gamd_, d4gamf_, d4gamg_, d4gami_, d4gamk_, d4gaml_, d4gamn_, d4gamp_, d4gamq_, d4gams_
automated match to d1fz1e_
complexed with fe

Domain d4gamm_: 4gam M: [202232]
Other proteins in same PDB: d4gama_, d4gamb_, d4gamd_, d4gamf_, d4gamg_, d4gami_, d4gamk_, d4gaml_, d4gamn_, d4gamp_, d4gamq_, d4gams_
automated match to d1fz1e_
complexed with fe

Domain d4gamr_: 4gam R: [194029]
Other proteins in same PDB: d4gama_, d4gamb_, d4gamd_, d4gamf_, d4gamg_, d4gami_, d4gamk_, d4gaml_, d4gamn_, d4gamp_, d4gamq_, d4gams_
automated match to d1fz1f_
complexed with fe

More info for Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit

Timeline for Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit:

Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit first appeared (with stable ids) in SCOP 1.55
Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit appears in SCOPe 2.05
Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit appears in SCOPe 2.07
Species Methylococcus capsulatus [TaxId:414] from a.23.3.1 Methane monooxygenase hydrolase, gamma subunit appears in the current release, SCOPe 2.08