SCOPe 2.02: Protein: Histone H2A

Lineage for Protein: Histone H2A

Root: SCOPe 2.02
Class a: All alpha proteins [46456] (284 folds)
Fold a.22: Histone-fold [47112] (1 superfamily)
core: 3 helices; long middle helix is flanked at each end with shorter ones
Superfamily a.22.1: Histone-fold [47113] (4 families)
Family a.22.1.1: Nucleosome core histones [47114] (6 proteins)
form octamers composed of two copies of each of the four histones
Protein Histone H2A [47115] (6 species)

Species:

African clawed frog (Xenopus laevis) [TaxId:8355] [47117] (33 PDB entries)

Domains for 1aoi:
1. Domain d1aoic_: 1aoi C: [16440]
  Other proteins in same PDB: d1aoia_, d1aoib_, d1aoid_, d1aoie_, d1aoif_, d1aoih_
  protein/DNA complex; complexed with mn
2. Domain d1aoig_: 1aoi G: [16441]
  Other proteins in same PDB: d1aoia_, d1aoib_, d1aoid_, d1aoie_, d1aoif_, d1aoih_
  protein/DNA complex; complexed with mn
Domains for 1kx3:
1. Domain d1kx3c_: 1kx3 C: [77579]
  Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3d_, d1kx3e_, d1kx3f_, d1kx3h_
  protein/DNA complex; complexed with mn
2. Domain d1kx3g_: 1kx3 G: [77583]
  Other proteins in same PDB: d1kx3a_, d1kx3b_, d1kx3d_, d1kx3e_, d1kx3f_, d1kx3h_
  protein/DNA complex; complexed with mn
Domains for 1kx4:
1. Domain d1kx4c_: 1kx4 C: [77587]
  Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4d_, d1kx4e_, d1kx4f_, d1kx4h_
  protein/DNA complex; complexed with cl, mn
2. Domain d1kx4g_: 1kx4 G: [77591]
  Other proteins in same PDB: d1kx4a_, d1kx4b_, d1kx4d_, d1kx4e_, d1kx4f_, d1kx4h_
  protein/DNA complex; complexed with cl, mn
Domains for 1kx5:
1. Domain d1kx5c_: 1kx5 C: [77595]
  Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5d_, d1kx5e_, d1kx5f_, d1kx5h_
  protein/DNA complex; complexed with cl, mn
2. Domain d1kx5g_: 1kx5 G: [77599]
  Other proteins in same PDB: d1kx5a_, d1kx5b_, d1kx5d_, d1kx5e_, d1kx5f_, d1kx5h_
  protein/DNA complex; complexed with cl, mn
Domains for 1m18:
1. Domain d1m18c_: 1m18 C: [78373]
  Other proteins in same PDB: d1m18a_, d1m18b_, d1m18d_, d1m18e_, d1m18f_, d1m18h_
  protein/DNA complex; complexed with abu, imt, mn
2. Domain d1m18g_: 1m18 G: [78377]
  Other proteins in same PDB: d1m18a_, d1m18b_, d1m18d_, d1m18e_, d1m18f_, d1m18h_
  protein/DNA complex; complexed with abu, imt, mn
Domains for 1m19:
1. Domain d1m19c_: 1m19 C: [78381]
  Other proteins in same PDB: d1m19a_, d1m19b_, d1m19d_, d1m19e_, d1m19f_, d1m19h_
  protein/DNA complex; complexed with imt, mn
2. Domain d1m19g_: 1m19 G: [78385]
  Other proteins in same PDB: d1m19a_, d1m19b_, d1m19d_, d1m19e_, d1m19f_, d1m19h_
  protein/DNA complex; complexed with imt, mn
Domains for 1m1a:
1. Domain d1m1ac_: 1m1a C: [78389]
  Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ad_, d1m1ae_, d1m1af_, d1m1ah_
  protein/DNA complex; complexed with imt, mn
2. Domain d1m1ag_: 1m1a G: [78393]
  Other proteins in same PDB: d1m1aa_, d1m1ab_, d1m1ad_, d1m1ae_, d1m1af_, d1m1ah_
  protein/DNA complex; complexed with imt, mn
Domains for 1p34:
1. Domain d1p34c_: 1p34 C: [93972]
  Other proteins in same PDB: d1p34a_, d1p34b_, d1p34d_, d1p34e_, d1p34f_, d1p34h_
  protein/DNA complex; mutant
2. Domain d1p34g_: 1p34 G: [93976]
  Other proteins in same PDB: d1p34a_, d1p34b_, d1p34d_, d1p34e_, d1p34f_, d1p34h_
  protein/DNA complex; mutant
Domains for 1p3a:
1. Domain d1p3ac_: 1p3a C: [93982]
  Other proteins in same PDB: d1p3aa_, d1p3ab_, d1p3ad_, d1p3ae_, d1p3af_, d1p3ah_
  protein/DNA complex; mutant
2. Domain d1p3ag_: 1p3a G: [93986]
  Other proteins in same PDB: d1p3aa_, d1p3ab_, d1p3ad_, d1p3ae_, d1p3af_, d1p3ah_
  protein/DNA complex; mutant
Domains for 1p3b:
1. Domain d1p3bc_: 1p3b C: [93990]
  Other proteins in same PDB: d1p3ba_, d1p3bb_, d1p3bd_, d1p3be_, d1p3bf_, d1p3bh_
  protein/DNA complex; mutant
2. Domain d1p3bg_: 1p3b G: [93994]
  Other proteins in same PDB: d1p3ba_, d1p3bb_, d1p3bd_, d1p3be_, d1p3bf_, d1p3bh_
  protein/DNA complex; mutant
Domains for 1p3f:
1. Domain d1p3fc_: 1p3f C: [94000]
  Other proteins in same PDB: d1p3fa_, d1p3fb_, d1p3fd_, d1p3fe_, d1p3ff_, d1p3fh_
  protein/DNA complex; mutant
2. Domain d1p3fg_: 1p3f G: [94004]
  Other proteins in same PDB: d1p3fa_, d1p3fb_, d1p3fd_, d1p3fe_, d1p3ff_, d1p3fh_
  protein/DNA complex; mutant
Domains for 1p3g:
1. Domain d1p3gc_: 1p3g C: [94008]
  Other proteins in same PDB: d1p3ga_, d1p3gb_, d1p3gd_, d1p3ge_, d1p3gf_, d1p3gh_
  protein/DNA complex; mutant
2. Domain d1p3gg_: 1p3g G: [94012]
  Other proteins in same PDB: d1p3ga_, d1p3gb_, d1p3gd_, d1p3ge_, d1p3gf_, d1p3gh_
  protein/DNA complex; mutant
Domains for 1p3i:
1. Domain d1p3ic_: 1p3i C: [94016]
  Other proteins in same PDB: d1p3ia_, d1p3ib_, d1p3id_, d1p3ie_, d1p3if_, d1p3ih_
  protein/DNA complex; mutant
2. Domain d1p3ig_: 1p3i G: [94020]
  Other proteins in same PDB: d1p3ia_, d1p3ib_, d1p3id_, d1p3ie_, d1p3if_, d1p3ih_
  protein/DNA complex; mutant
Domains for 1p3k:
1. Domain d1p3kc_: 1p3k C: [94026]
  Other proteins in same PDB: d1p3ka_, d1p3kb_, d1p3kd_, d1p3ke_, d1p3kf_, d1p3kh_
  protein/DNA complex; mutant
2. Domain d1p3kg_: 1p3k G: [94030]
  Other proteins in same PDB: d1p3ka_, d1p3kb_, d1p3kd_, d1p3ke_, d1p3kf_, d1p3kh_
  protein/DNA complex; mutant
Domains for 1p3l:
1. Domain d1p3lc_: 1p3l C: [94034]
  Other proteins in same PDB: d1p3la_, d1p3lb_, d1p3ld_, d1p3le_, d1p3lf_, d1p3lh_
  protein/DNA complex; mutant
2. Domain d1p3lg_: 1p3l G: [94038]
  Other proteins in same PDB: d1p3la_, d1p3lb_, d1p3ld_, d1p3le_, d1p3lf_, d1p3lh_
  protein/DNA complex; mutant
Domains for 1p3m:
1. Domain d1p3mc_: 1p3m C: [94042]
  Other proteins in same PDB: d1p3ma_, d1p3mb_, d1p3md_, d1p3me_, d1p3mf_, d1p3mh_
  protein/DNA complex; mutant
2. Domain d1p3mg_: 1p3m G: [94046]
  Other proteins in same PDB: d1p3ma_, d1p3mb_, d1p3md_, d1p3me_, d1p3mf_, d1p3mh_
  protein/DNA complex; mutant
Domains for 1p3o:
1. Domain d1p3oc_: 1p3o C: [94051]
  Other proteins in same PDB: d1p3oa_, d1p3ob_, d1p3od_, d1p3oe_, d1p3of_, d1p3oh_
  protein/DNA complex; mutant
2. Domain d1p3og_: 1p3o G: [94055]
  Other proteins in same PDB: d1p3oa_, d1p3ob_, d1p3od_, d1p3oe_, d1p3of_, d1p3oh_
  protein/DNA complex; mutant
Domains for 1p3p:
1. Domain d1p3pc_: 1p3p C: [94059]
  Other proteins in same PDB: d1p3pa_, d1p3pb_, d1p3pd_, d1p3pe_, d1p3pf_, d1p3ph_
  protein/DNA complex; mutant
2. Domain d1p3pg_: 1p3p G: [94063]
  Other proteins in same PDB: d1p3pa_, d1p3pb_, d1p3pd_, d1p3pe_, d1p3pf_, d1p3ph_
  protein/DNA complex; mutant
Domains for 1s32:
1. Domain d1s32c_: 1s32 C: [98414]
  Other proteins in same PDB: d1s32a_, d1s32b_, d1s32d_, d1s32e_, d1s32f_, d1s32h_
  protein/DNA complex; complexed with cl, imt, mn, ogg
2. Domain d1s32g_: 1s32 G: [98418]
  Other proteins in same PDB: d1s32a_, d1s32b_, d1s32d_, d1s32e_, d1s32f_, d1s32h_
  protein/DNA complex; complexed with cl, imt, mn, ogg
Domains for 1zla:
1. Domain d1zlac1: 1zla C:814-920 [125242]
  Other proteins in same PDB: d1zlaa_, d1zlab_, d1zlad_, d1zlae_, d1zlaf_, d1zlah_
  protein/DNA complex
2. Domain d1zlag_: 1zla G: [125246]
  Other proteins in same PDB: d1zlaa_, d1zlab_, d1zlad_, d1zlae_, d1zlaf_, d1zlah_
  automated match to d1kx5c_
  protein/DNA complex
Domains for 2nzd:
1. Domain d2nzdc_: 2nzd C: [138850]
  Other proteins in same PDB: d2nzda_, d2nzdb_, d2nzdd_, d2nzde_, d2nzdf_, d2nzdh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with mn
2. Domain d2nzdg_: 2nzd G: [138853]
  Other proteins in same PDB: d2nzda_, d2nzdb_, d2nzdd_, d2nzde_, d2nzdf_, d2nzdh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with mn
Domains for 3b6f:
1. Domain d3b6fc1: 3b6f C:15-118 [154886]
  Other proteins in same PDB: d3b6fa1, d3b6fb1, d3b6fd1, d3b6fe1, d3b6ff1, d3b6fh1
  automatically matched to d1aoic_
  protein/DNA complex; complexed with mn
2. Domain d3b6fg1: 3b6f G:15-118 [154890]
  Other proteins in same PDB: d3b6fa1, d3b6fb1, d3b6fd1, d3b6fe1, d3b6ff1, d3b6fh1
  automatically matched to d1aoic_
  protein/DNA complex; complexed with mn
Domains for 3b6g:
1. Domain d3b6gc1: 3b6g C:15-118 [154894]
  Other proteins in same PDB: d3b6ga1, d3b6gb1, d3b6gd1, d3b6ge1, d3b6gf1, d3b6gh1
  automatically matched to d1aoic_
  protein/DNA complex; complexed with mn
2. Domain d3b6gg1: 3b6g G:15-118 [154898]
  Other proteins in same PDB: d3b6ga1, d3b6gb1, d3b6gd1, d3b6ge1, d3b6gf1, d3b6gh1
  automatically matched to d1aoic_
  protein/DNA complex; complexed with mn
Domains for 3c1b:
1. Domain d3c1bc_: 3c1b C: [155853]
  Other proteins in same PDB: d3c1ba_, d3c1bb_, d3c1bd_, d3c1be_, d3c1bf_, d3c1bh_
  automated match to d1kx5c_
  protein/DNA complex
2. Domain d3c1bg_: 3c1b G: [155857]
  Other proteins in same PDB: d3c1ba_, d3c1bb_, d3c1bd_, d3c1be_, d3c1bf_, d3c1bh_
  automated match to d1kx5c_
  protein/DNA complex
Domains for 3c1c:
1. Domain d3c1cc1: 3c1c C:814-918 [155860]
  Other proteins in same PDB: d3c1cb1, d3c1cd1, d3c1cf1, d3c1ch1
  automatically matched to d1aoic_
  protein/DNA complex
2. Domain d3c1cg1: 3c1c G:1016-1118 [155863]
  Other proteins in same PDB: d3c1cb1, d3c1cd1, d3c1cf1, d3c1ch1
  automatically matched to d1aoic_
  protein/DNA complex
Domains for 3kuy:
1. Domain d3kuyc_: 3kuy C: [179729]
  Other proteins in same PDB: d3kuya_, d3kuyb_, d3kuyd_, d3kuye_, d3kuyf_, d3kuyh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with atv, mn
2. Domain d3kuyg_: 3kuy G: [179731]
  Other proteins in same PDB: d3kuya_, d3kuyb_, d3kuyd_, d3kuye_, d3kuyf_, d3kuyh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with atv, mn

Domains for 3lel:

Domain d3lelc_: 3lel C: [191755]
Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
automated match to d1kx5c_
protein/DNA complex; complexed with mn

Domain d3lelg_: 3lel G: [191758]
Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
automated match to d1kx5c_
protein/DNA complex; complexed with mn

Domain d3lelm_: 3lel M: [191761]
Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
automated match to d1kx5c_
protein/DNA complex; complexed with mn

Domain d3lelq_: 3lel Q: [191764]
Other proteins in same PDB: d3lela_, d3lelb_, d3leld_, d3lele_, d3lelf_, d3lelh_, d3lelk_, d3lell_, d3leln_, d3lelo_, d3lelp_, d3lelr_
automated match to d1kx5c_
protein/DNA complex; complexed with mn

Domains for 3lz0:
1. Domain d3lz0c_: 3lz0 C: [180644]
  Other proteins in same PDB: d3lz0a_, d3lz0e_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn
2. Domain d3lz0g_: 3lz0 G: [180646]
  Other proteins in same PDB: d3lz0a_, d3lz0e_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn
Domains for 3lz1:
1. Domain d3lz1c_: 3lz1 C: [180648]
  Other proteins in same PDB: d3lz1a_, d3lz1e_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn
2. Domain d3lz1g_: 3lz1 G: [180650]
  Other proteins in same PDB: d3lz1a_, d3lz1e_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn
Domains for 3mgp:
1. Domain d3mgpc_: 3mgp C: [181194]
  Other proteins in same PDB: d3mgpa_, d3mgpb_, d3mgpd_, d3mgpe_, d3mgpf_, d3mgph_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, co
2. Domain d3mgpg_: 3mgp G: [181196]
  Other proteins in same PDB: d3mgpa_, d3mgpb_, d3mgpd_, d3mgpe_, d3mgpf_, d3mgph_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, co
Domains for 3mgq:
1. Domain d3mgqc_: 3mgq C: [181198]
  Other proteins in same PDB: d3mgqa_, d3mgqb_, d3mgqd_, d3mgqe_, d3mgqf_, d3mgqh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, ni
2. Domain d3mgqg_: 3mgq G: [181200]
  Other proteins in same PDB: d3mgqa_, d3mgqb_, d3mgqd_, d3mgqe_, d3mgqf_, d3mgqh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, ni
Domains for 3mgr:
1. Domain d3mgrc_: 3mgr C: [181202]
  Other proteins in same PDB: d3mgra_, d3mgrb_, d3mgrd_, d3mgre_, d3mgrf_, d3mgrh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn, rb
2. Domain d3mgrg_: 3mgr G: [181204]
  Other proteins in same PDB: d3mgra_, d3mgrb_, d3mgrd_, d3mgre_, d3mgrf_, d3mgrh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with cl, mn, rb
Domains for 3mnn:
1. Domain d3mnnc_: 3mnn C: [181452]
  Other proteins in same PDB: d3mnna_, d3mnnb_, d3mnnd_, d3mnne_, d3mnnf_, d3mnnh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with mg, mml, ptw, ru, so4
2. Domain d3mnng_: 3mnn G: [181454]
  Other proteins in same PDB: d3mnna_, d3mnnb_, d3mnnd_, d3mnne_, d3mnnf_, d3mnnh_
  automated match to d1kx5c_
  protein/DNA complex; complexed with mg, mml, ptw, ru, so4

Baker's yeast (Saccharomyces cerevisiae), H2A.1 [TaxId:4932] [68984] (2 PDB entries)
1. Domains for 1id3:
  1. Domain d1id3c_: 1id3 C: [66114]
    Other proteins in same PDB: d1id3a_, d1id3b_, d1id3d_, d1id3e_, d1id3f_, d1id3h_
    protein/DNA complex; complexed with mn
  2. Domain d1id3g_: 1id3 G: [66118]
    Other proteins in same PDB: d1id3a_, d1id3b_, d1id3d_, d1id3e_, d1id3f_, d1id3h_
    protein/DNA complex; complexed with mn
2. Domain for 2jss:
  - Domain d2jssa1: 2jss A:96-192 [148192]
    Other proteins in same PDB: d2jssa2
    automatically matched to d1id3c_
Chicken (Gallus gallus), erythrocytes [TaxId:9031] [47116] (6 PDB entries)
Uniprot P02263
1. Domains for 1eqz:
  1. Domain d1eqza_: 1eqz A: [16436]
    Other proteins in same PDB: d1eqzb_, d1eqzc_, d1eqzd_, d1eqzf_, d1eqzg_, d1eqzh_
    protein/DNA complex; complexed with cac, cl, k, mn
  2. Domain d1eqze_: 1eqz E: [16437]
    Other proteins in same PDB: d1eqzb_, d1eqzc_, d1eqzd_, d1eqzf_, d1eqzg_, d1eqzh_
    protein/DNA complex; complexed with cac, cl, k, mn
2. Domain for 1hio:
  - Domain d1hioa_: 1hio A: [16439]
    Other proteins in same PDB: d1hiob_, d1hioc_, d1hiod_
3. Domains for 1hq3:
  1. Domain d1hq3a_: 1hq3 A: [16434]
    Other proteins in same PDB: d1hq3b_, d1hq3c_, d1hq3d_, d1hq3f_, d1hq3g_, d1hq3h_
    complexed with cl, po4
  2. Domain d1hq3e_: 1hq3 E: [16435]
    Other proteins in same PDB: d1hq3b_, d1hq3c_, d1hq3d_, d1hq3f_, d1hq3g_, d1hq3h_
    complexed with cl, po4
4. Domains for 1tzy:
  1. Domain d1tzya_: 1tzy A: [107530]
    Other proteins in same PDB: d1tzyb_, d1tzyc_, d1tzyd_, d1tzyf_, d1tzyg_, d1tzyh_
    complexed with cl, po4
  2. Domain d1tzye_: 1tzy E: [107534]
    Other proteins in same PDB: d1tzyb_, d1tzyc_, d1tzyd_, d1tzyf_, d1tzyg_, d1tzyh_
    complexed with cl, po4
5. Domains for 2aro:
  1. Domain d2aroa_: 2aro A: [127209]
    Other proteins in same PDB: d2arob_, d2aroc_, d2arod_, d2arof_, d2arog_, d2aroh_
    automated match to d1kx5c_
    complexed with cl, po4
  2. Domain d2aroe_: 2aro E: [127213]
    Other proteins in same PDB: d2arob_, d2aroc_, d2arod_, d2arof_, d2arog_, d2aroh_
    automated match to d1kx5c_
    complexed with cl, po4
6. Domain for 2hio:
  - Domain d2hioa_: 2hio A: [16438]
    Other proteins in same PDB: d2hiob_, d2hioc_, d2hiod_
Human (Homo sapiens), H2A.a [TaxId:9606] [140392] (1 PDB entry)
Uniprot P28001 11-118
- Domains for 2cv5:
  1. Domain d2cv5c1: 2cv5 C:11-118 [130849]
    Other proteins in same PDB: d2cv5a_, d2cv5b_, d2cv5d1, d2cv5e_, d2cv5f_, d2cv5h_
    protein/DNA complex; complexed with cl, mn
  2. Domain d2cv5g_: 2cv5 G: [130853]
    Other proteins in same PDB: d2cv5a_, d2cv5b_, d2cv5d1, d2cv5e_, d2cv5f_, d2cv5h_
    automated match to d1kx5c_
    protein/DNA complex; complexed with cl, mn
Human (Homo sapiens), variant H2A.Z [TaxId:9606] [47118] (1 PDB entry)
- Domains for 1f66:
  1. Domain d1f66c_: 1f66 C: [16442]
    Other proteins in same PDB: d1f66a_, d1f66b_, d1f66d_, d1f66e_, d1f66f_, d1f66h_
    protein/DNA complex; complexed with mn
  2. Domain d1f66g_: 1f66 G: [16443]
    Other proteins in same PDB: d1f66a_, d1f66b_, d1f66d_, d1f66e_, d1f66f_, d1f66h_
    protein/DNA complex; complexed with mn
Mouse (Mus musculus), H2A.1 [TaxId:10090] [158384] (1 PDB entry)
Uniprot P22752 14-118
- Domain for 2f8n:
  - Domain d2f8nk1: 2f8n K:14-118 [145150]
    Other proteins in same PDB: d2f8na_, d2f8nb_, d2f8nd_, d2f8ne_, d2f8nf_, d2f8ng_, d2f8nh_
    protein/DNA complex

More info for Protein Histone H2A from a.22.1.1: Nucleosome core histones

Timeline for Protein Histone H2A from a.22.1.1: Nucleosome core histones:

Protein Histone H2A from a.22.1.1: Nucleosome core histones first appeared (with stable ids) in SCOP 1.55
Protein Histone H2A from a.22.1.1: Nucleosome core histones appears in SCOPe 2.01
Protein Histone H2A from a.22.1.1: Nucleosome core histones appears in SCOPe 2.03
Protein Histone H2A from a.22.1.1: Nucleosome core histones appears in the current release, SCOPe 2.08