SCOPe 2.07: Protein: Replication terminator protein (RTP)

Lineage for Protein: Replication terminator protein (RTP)

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families)
contains a small beta-sheet (wing)
Family a.4.5.7: Replication terminator protein (RTP) [46807] (1 protein)
automatically mapped to Pfam PF02334
Protein Replication terminator protein (RTP) [46808] (1 species)
contains long helix in the C-terminal extension; forms dimer similar to the LysR-like dimer

Species:

Bacillus subtilis [TaxId:1423] [46809] (7 PDB entries)
1. Domains for 1bm9:
  1. Domain d1bm9a_: 1bm9 A: [16116]
    CASP1
  2. Domain d1bm9b_: 1bm9 B: [16117]
    CASP1
2. Domains for 1f4k:
  1. Domain d1f4ka_: 1f4k A: [59646]
    complexed with DNA
    protein/DNA complex
  2. Domain d1f4kb_: 1f4k B: [59647]
    complexed with DNA
    protein/DNA complex
3. Domains for 1j0r:
  1. Domain d1j0ra_: 1j0r A: [90745]
    mutant
  2. Domain d1j0rb_: 1j0r B: [90746]
    mutant
4. Domains for 2dpd:
  1. Domain d2dpda_: 2dpd A: [131610]
    automated match to d1bm9a_
    protein/DNA complex
  2. Domain d2dpdb_: 2dpd B: [131611]
    automated match to d1bm9a_
    protein/DNA complex
5. Domain for 2dpu:
  - Domain d2dpua_: 2dpu A: [131617]
    automated match to d1bm9a_
    protein/DNA complex
6. Domains for 2dqr:
  1. Domain d2dqra_: 2dqr A: [241641]
    automated match to d1bm9a_
    mutant
  2. Domain d2dqrb_: 2dqr B: [241642]
    automated match to d1bm9a_
    mutant
  3. Domain d2dqrc_: 2dqr C: [241643]
    automated match to d1bm9a_
    mutant
  4. Domain d2dqrd_: 2dqr D: [241644]
    automated match to d1bm9a_
    mutant
7. Domains for 2efw:
  1. Domain d2efwa_: 2efw A: [146820]
    automated match to d1bm9a_
    protein/DNA complex
  2. Domain d2efwb_: 2efw B: [146821]
    automated match to d1bm9a_
    protein/DNA complex
  3. Domain d2efwf_: 2efw F: [146822]
    automated match to d1bm9a_
    protein/DNA complex
  4. Domain d2efwg_: 2efw G: [146823]
    automated match to d1bm9a_
    protein/DNA complex

More info for Protein Replication terminator protein (RTP) from a.4.5.7: Replication terminator protein (RTP)

Timeline for Protein Replication terminator protein (RTP) from a.4.5.7: Replication terminator protein (RTP):

Protein Replication terminator protein (RTP) from a.4.5.7: Replication terminator protein (RTP) first appeared (with stable ids) in SCOP 1.55
Protein Replication terminator protein (RTP) from a.4.5.7: Replication terminator protein (RTP) appears in SCOPe 2.06
Protein Replication terminator protein (RTP) from a.4.5.7: Replication terminator protein (RTP) appears in the current release, SCOPe 2.08