Lineage for Protein: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase

  1. Root: SCOPe 2.03
  2. 1253684Class a: All alpha proteins [46456] (284 folds)
  3. 1257168Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 1257169Superfamily a.3.1: Cytochrome c [46626] (9 families) (S)
    covalently-bound heme completes the core
  5. 1257566Family a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46671] (1 protein)
  6. 1257567Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase [46672] (3 species)
    the C-terminal domain is a 8-bladed beta-propeller

Species:

  1. 1257568Paracoccus denitrificans [TaxId:266] [46675] (2 PDB entries)
    1. Domains for 1e2r:
      1. 1257571Domain d1e2ra1: 1e2r A:36-135 [15953]
        Other proteins in same PDB: d1e2ra2, d1e2rb2
        complexed with cyn, dhe, gol, hec
      2. 1257572Domain d1e2rb1: 1e2r B:25-135 [15954]
        Other proteins in same PDB: d1e2ra2, d1e2rb2
        complexed with cyn, dhe, gol, hec
    2. Domains for 1qks:
      1. 1257569Domain d1qksa1: 1qks A:9-135 [15951]
        Other proteins in same PDB: d1qksa2, d1qksb2
        complexed with dhe, gol, hec, so4
      2. 1257570Domain d1qksb1: 1qks B:9-135 [15952]
        Other proteins in same PDB: d1qksa2, d1qksb2
        complexed with dhe, gol, hec, so4
  2. 1257573Paracoccus pantotrophus [TaxId:82367] [46673] (11 PDB entries)
    formerly Thiosphaera pantotropha
    1. Domains for 1aof:
      1. 1257586Domain d1aofa1: 1aof A:36-133 [15937]
        Other proteins in same PDB: d1aofa2, d1aofb2
        complexed with dhe, hem, so2
      2. 1257587Domain d1aofb1: 1aof B:26-133 [15938]
        Other proteins in same PDB: d1aofa2, d1aofb2
        complexed with dhe, hem, so2
    2. Domain for 1aom:
    3. Domains for 1aoq:
      1. 1257583Domain d1aoqa1: 1aoq A:17-133 [15934]
        Other proteins in same PDB: d1aoqa2, d1aoqb2
        complexed with 2no, dhe, hem, no
      2. 1257584Domain d1aoqb1: 1aoq B:9-133 [15935]
        Other proteins in same PDB: d1aoqa2, d1aoqb2
        complexed with 2no, dhe, hem, no
    4. Domain for 1dy7:
    5. Domains for 1gq1:
      1. 1257574Domain d1gq1a1: 1gq1 A:9-133 [76264]
        Other proteins in same PDB: d1gq1a2, d1gq1b2
        complexed with dhe, gol, hec, so4; mutant
      2. 1257575Domain d1gq1b1: 1gq1 B:9-133 [76266]
        Other proteins in same PDB: d1gq1a2, d1gq1b2
        complexed with dhe, gol, hec, so4; mutant
    6. Domains for 1h9x:
      1. 1257588Domain d1h9xa1: 1h9x A:42-133 [60855]
        Other proteins in same PDB: d1h9xa2, d1h9xb2
        complexed with dhe, hec, nhe, so4
      2. 1257589Domain d1h9xb1: 1h9x B:39-133 [60857]
        Other proteins in same PDB: d1h9xa2, d1h9xb2
        complexed with dhe, hec, nhe, so4
    7. Domains for 1h9y:
      1. 1257592Domain d1h9ya1: 1h9y A:48-133 [60859]
        Other proteins in same PDB: d1h9ya2, d1h9yb2
        complexed with cyn, dhe, hec, so4
      2. 1257593Domain d1h9yb1: 1h9y B:49-133 [60861]
        Other proteins in same PDB: d1h9ya2, d1h9yb2
        complexed with cyn, dhe, hec, so4
    8. Domains for 1hcm:
      1. 1257590Domain d1hcma1: 1hcm A:42-133 [60958]
        Other proteins in same PDB: d1hcma2, d1hcmb2
        complexed with dhe, hec, so4
      2. 1257591Domain d1hcmb1: 1hcm B:39-133 [60960]
        Other proteins in same PDB: d1hcma2, d1hcmb2
        complexed with dhe, hec, so4
    9. Domains for 1hj3:
      1. 1257579Domain d1hj3a1: 1hj3 A:17-133 [15930]
        Other proteins in same PDB: d1hj3a2, d1hj3b2
        complexed with dhe, gol, hec, oxy, so4
      2. 1257580Domain d1hj3b1: 1hj3 B:26-133 [15931]
        Other proteins in same PDB: d1hj3a2, d1hj3b2
        complexed with dhe, gol, hec, oxy, so4
    10. Domains for 1hj4:
      1. 1257581Domain d1hj4a1: 1hj4 A:17-133 [15932]
        Other proteins in same PDB: d1hj4a2, d1hj4b2
        complexed with dhe, gol, hec, so4
      2. 1257582Domain d1hj4b1: 1hj4 B:26-133 [15933]
        Other proteins in same PDB: d1hj4a2, d1hj4b2
        complexed with dhe, gol, hec, so4
    11. Domains for 1hj5:
      1. 1257576Domain d1hj5a1: 1hj5 A:9-133 [15927]
        Other proteins in same PDB: d1hj5a2, d1hj5b2
        complexed with dhe, gol, hec, so4
      2. 1257577Domain d1hj5b1: 1hj5 B:9-133 [15928]
        Other proteins in same PDB: d1hj5a2, d1hj5b2
        complexed with dhe, gol, hec, so4
  3. 1257594Pseudomonas aeruginosa [TaxId:287] [46674] (9 PDB entries)
    1. Domains for 1bl9:
      1. 1257608Domain d1bl9a1: 1bl9 A:7-117 [15947]
        Other proteins in same PDB: d1bl9a2, d1bl9b2
        complexed with dhe, hec, oh
      2. 1257609Domain d1bl9b1: 1bl9 B:7-117 [15948]
        Other proteins in same PDB: d1bl9a2, d1bl9b2
        complexed with dhe, hec, oh
    2. Domains for 1gjq:
      1. 1257597Domain d1gjqa1: 1gjq A:3-117 [70193]
        Other proteins in same PDB: d1gjqa2, d1gjqb2
        complexed with cyn, dhe, hec
      2. 1257598Domain d1gjqb1: 1gjq B:5-117 [70195]
        Other proteins in same PDB: d1gjqa2, d1gjqb2
        complexed with cyn, dhe, hec
    3. Domain for 1hzu:
    4. Domain for 1hzv:
    5. Domains for 1n15:
      1. 1257602Domain d1n15a1: 1n15 A:6-117 [15943]
        Other proteins in same PDB: d1n15a2, d1n15b2
        complexed with dhe, hec
      2. 1257603Domain d1n15b1: 1n15 B:5-117 [15944]
        Other proteins in same PDB: d1n15a2, d1n15b2
        complexed with dhe, hec
    6. Domains for 1n50:
      1. 1257606Domain d1n50a1: 1n50 A:6-117 [15949]
        Other proteins in same PDB: d1n50a2, d1n50b2
        complexed with dhe, hec
      2. 1257607Domain d1n50b1: 1n50 B:5-117 [15950]
        Other proteins in same PDB: d1n50a2, d1n50b2
        complexed with dhe, hec
    7. Domains for 1n90:
      1. 1257604Domain d1n90a1: 1n90 A:6-117 [15945]
        Other proteins in same PDB: d1n90a2, d1n90b2
        complexed with dhe, hec
      2. 1257605Domain d1n90b1: 1n90 B:5-117 [15946]
        Other proteins in same PDB: d1n90a2, d1n90b2
        complexed with dhe, hec
    8. Domains for 1nir:
      1. 1257595Domain d1nira1: 1nir A:6-117 [15939]
        Other proteins in same PDB: d1nira2, d1nirb2
        complexed with cl, dhe, hec, oh, po4
      2. 1257596Domain d1nirb1: 1nir B:5-117 [15940]
        Other proteins in same PDB: d1nira2, d1nirb2
        complexed with cl, dhe, hec, oh, po4
    9. Domains for 1nno:
      1. 1257600Domain d1nnoa1: 1nno A:5-117 [15941]
        Other proteins in same PDB: d1nnoa2, d1nnob2
        complexed with dhe, hec, no
      2. 1257601Domain d1nnob1: 1nno B:5-117 [15942]
        Other proteins in same PDB: d1nnoa2, d1nnob2
        complexed with dhe, hec, no

More info for Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase

Timeline for Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase:

  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase first appeared (with stable ids) in SCOP 1.55
  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase appears in SCOPe 2.02
  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase appears in SCOPe 2.04
  • Protein N-terminal (heme c) domain of cytochrome cd1-nitrite reductase from a.3.1.2: N-terminal (heme c) domain of cytochrome cd1-nitrite reductase appears in the current release, SCOPe 2.08