Lineage for Protein: Mitochondrial cytochrome c

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 904708Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 904709Superfamily a.3.1: Cytochrome c [46626] (9 families) (S)
    covalently-bound heme completes the core
  5. 904710Family a.3.1.1: monodomain cytochrome c [46627] (16 proteins)
  6. 904883Protein Mitochondrial cytochrome c [46642] (6 species)

Species:

  1. 904884Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [46643] (45 PDB entries)
    Uniprot P00044
    1. Domain for 1chh:
    2. Domain for 1chi:
    3. Domain for 1chj:
    4. Domain for 1cie:
    5. Domain for 1cif:
    6. Domain for 1cig:
    7. Domain for 1cih:
    8. Domain for 1crg:
    9. Domain for 1crh:
    10. Domain for 1cri:
    11. Domain for 1crj:
    12. Domain for 1csu:
    13. Domain for 1csv:
    14. Domain for 1csw:
    15. Domain for 1csx:
    16. Domain for 1cty:
    17. Domain for 1ctz:
    18. Domain for 1fhb:
    19. Domain for 1irv:
    20. Domain for 1irw:
    21. Domain for 1kyo:
    22. Domain for 1lms:
    23. Domain for 1nmi:
    24. Domain for 1rap:
    25. Domain for 1raq:
    26. Domains for 1s6v:
      1. 904889Domain d1s6vb_: 1s6v B: [98610]
        Other proteins in same PDB: d1s6va_, d1s6vc_
        complexed with hem, iod
      2. 904890Domain d1s6vd_: 1s6v D: [98612]
        Other proteins in same PDB: d1s6va_, d1s6vc_
        complexed with hem, iod
    27. Domains for 1u74:
      1. 904920Domain d1u74b_: 1u74 B: [107705]
        Other proteins in same PDB: d1u74a_, d1u74c_
        complexed with hem, po4, znh
      2. 904921Domain d1u74d_: 1u74 D: [107707]
        Other proteins in same PDB: d1u74a_, d1u74c_
        complexed with hem, po4, znh
    28. Domain for 1ycc:
    29. Domain for 1yea:
    30. Domain for 1yeb:
    31. Domain for 1yfc:
    32. Domain for 1yic:
    33. Domain for 1ytc:
    34. Domain for 2b0z:
    35. Domains for 2b10:
      1. 904924Domain d2b10b1: 2b10 B:-4-103 [144943]
        Other proteins in same PDB: d2b10a_, d2b10c_
        complexed with hem, znh
      2. 904925Domain d2b10d_: 2b10 D: [144944]
        Other proteins in same PDB: d2b10a_, d2b10c_
        automated match to d2b10b1
        complexed with hem, znh
    36. Domains for 2b11:
      1. 904918Domain d2b11b1: 2b11 B:296-403 [144945]
        Other proteins in same PDB: d2b11a_, d2b11c_
        complexed with hem, znh
      2. 904919Domain d2b11d_: 2b11 D: [144946]
        Other proteins in same PDB: d2b11a_, d2b11c_
        automated match to d2b11b1
        complexed with hem, znh
    37. Domain for 2b12:
    38. Domain for 2bcn:
    39. Domain for 2gb8:
    40. Domain for 2hv4:
    41. Domain for 2orl:
    42. Domains for 2pcc:
      1. 904913Domain d2pccb_: 2pcc B: [15860]
        Other proteins in same PDB: d2pcca_, d2pccc_
        complexed with hem, so4
      2. 904914Domain d2pccd_: 2pcc D: [15861]
        Other proteins in same PDB: d2pcca_, d2pccc_
        complexed with hem, so4
    43. Domain for 2ycc:
    44. Domain for 3cx5:
    45. Domain for 3cxh:
  2. 904935Bluefin tuna (Thunnus thynnus) [TaxId:8237] [46646] (5 PDB entries)
    identical sequence to Thunnus alalunga, TaxId: 8235
    1. Domains for 1i54:
      1. 904939Domain d1i54a_: 1i54 A: [61768]
        complexed with hem, znh
      2. 904940Domain d1i54b_: 1i54 B: [61769]
        complexed with hem, znh
    2. Domains for 1i55:
      1. 904941Domain d1i55a_: 1i55 A: [61770]
        complexed with hem, znh
      2. 904942Domain d1i55b_: 1i55 B: [61771]
        complexed with hem, znh
    3. Domains for 1lfm:
      1. 904937Domain d1lfma_: 1lfm A: [73883]
        complexed with coh
      2. 904938Domain d1lfmb_: 1lfm B: [73884]
        complexed with coh
    4. Domains for 3cyt:
      1. 904943Domain d3cyti_: 3cyt I: [15880]
        complexed with hem
      2. 904944Domain d3cyto_: 3cyt O: [15879]
        complexed with hem
    5. Domain for 5cyt:
  3. 904945Bonito (Katsuwonus pelamis) [TaxId:8226] [46647] (1 PDB entry)
  4. 904948Horse (Equus caballus) [TaxId:9796] [46644] (20 PDB entries)
    Uniprot P00004
    1. Domain for 1akk:
    2. Domains for 1crc:
      1. 904967Domain d1crca_: 1crc A: [15867]
        complexed with hem
      2. 904968Domain d1crcb_: 1crc B: [15868]
        complexed with hem
    3. Domain for 1fi7:
    4. Domain for 1fi9:
    5. Domain for 1giw:
    6. Domain for 1hrc:
    7. Domain for 1i5t:
    8. Domain for 1lc1:
    9. Domain for 1lc2:
    10. Domain for 1m60:
    11. Domain for 1ocd:
    12. Domain for 1u75:
    13. Domain for 1wej:
    14. Domain for 2frc:
    15. Domain for 2giw:
    16. Domain for 2pcb:
    17. Domains for 3nbs:
      1. 904963Domain d3nbsa_: 3nbs A: [182127]
        automated match to d1akka_
        complexed with hem, peg, pg4, po4
      2. 904964Domain d3nbsb_: 3nbs B: [182128]
        automated match to d1akka_
        complexed with hem, peg, pg4, po4
      3. 904965Domain d3nbsc_: 3nbs C: [182129]
        automated match to d1akka_
        complexed with hem, peg, pg4, po4
      4. 904966Domain d3nbsd_: 3nbs D: [182130]
        automated match to d1akka_
        complexed with hem, peg, pg4, po4
    18. Domains for 3nbt:
      1. 904957Domain d3nbta_: 3nbt A: [182131]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
      2. 904958Domain d3nbtb_: 3nbt B: [182132]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
      3. 904959Domain d3nbtc_: 3nbt C: [182133]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
      4. 904960Domain d3nbtd_: 3nbt D: [182134]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
      5. 904961Domain d3nbte_: 3nbt E: [182135]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
      6. 904962Domain d3nbtf_: 3nbt F: [182136]
        automated match to d1akka_
        complexed with hem, peg, pg4, pge
    19. Domains for 3o1y:
      1. 904949Domain d3o1ya_: 3o1y A: [182738]
        automated match to d1akka_
        complexed with hec, no3
      2. 904950Domain d3o1yb_: 3o1y B: [182739]
        automated match to d1akka_
        complexed with hec, no3
      3. 904951Domain d3o1yc_: 3o1y C: [182740]
        automated match to d1akka_
        complexed with hec, no3
    20. Domains for 3o20:
      1. 904954Domain d3o20a_: 3o20 A: [182742]
        automated match to d1akka_
        complexed with hec, no3
      2. 904955Domain d3o20b_: 3o20 B: [182743]
        automated match to d1akka_
        complexed with hec, no3
      3. 904956Domain d3o20c_: 3o20 C: [182744]
        automated match to d1akka_
        complexed with hec, no3
  5. 904982Human (Homo sapiens) [TaxId:9606] [109644] (2 PDB entries)
    Uniprot P99999
    1. Domain for 1j3s:
    2. Domains for 3nwv:
      1. 904983Domain d3nwva_: 3nwv A: [182593]
        automated match to d1j3sa_
        complexed with hem
      2. 904984Domain d3nwvb_: 3nwv B: [182594]
        automated match to d1j3sa_
        complexed with hem
      3. 904985Domain d3nwvc_: 3nwv C: [182595]
        automated match to d1j3sa_
        complexed with hem
      4. 904986Domain d3nwvd_: 3nwv D: [182596]
        automated match to d1j3sa_
        complexed with hem
  6. 904988Rice embryos (Oryza sativa) [TaxId:4530] [46645] (1 PDB entry)

More info for Protein Mitochondrial cytochrome c from a.3.1.1: monodomain cytochrome c

Timeline for Protein Mitochondrial cytochrome c from a.3.1.1: monodomain cytochrome c: