Lineage for Family a.3.1.1: monodomain cytochrome c

  1. Root: SCOP 1.67
  2. 349259Class a: All alpha proteins [46456] (202 folds)
  3. 350824Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 350825Superfamily a.3.1: Cytochrome c [46626] (8 families) (S)
    covalently-bound heme completes the core
  5. 350826Family a.3.1.1: monodomain cytochrome c [46627] (14 proteins)

Proteins:

  1. 350827Cytochrome c'' [68950] (1 species)
    close homologue of SHP
  2. 350834Cytochrome c2 [46650] (8 species)
    1. 350835Species Paracoccus denitrificans [TaxId:266] [46657] (2 PDB entries)
    2. 350838Species Rhodobacter capsulatus [TaxId:1061] [46652] (2 PDB entries)
    3. 350842Species Rhodobacter sphaeroides [TaxId:1063] [46653] (5 PDB entries)
    4. 350850Species Rhodopila globiformis [TaxId:1071] [46656] (1 PDB entry)
    5. 350853Species Rhodopseudomonas palustris [TaxId:1076] [46655] (4 PDB entries)
    6. 350864Species Rhodopseudomonas viridis [TaxId:1079] [46654] (3 PDB entries)
    7. 350868Species Rhodospirillum centenum [TaxId:34018] [68947] (1 PDB entry)
    8. 350870Species Rhodospirillum rubrum [TaxId:1085] [46651] (2 PDB entries)
  3. 350873Cytochrome c5 [46658] (1 species)
  4. 350876Cytochrome c550 [100991] (1 species)
  5. 350879Cytochrome c551 [46660] (4 species)
    1. 350880Species Ectothiorhodospira halophila [TaxId:17] [46664] (1 PDB entry)
    2. 350882Species Paracoccus denitrificans [TaxId:266] [46663] (3 PDB entries)
    3. 350892Species Pseudomonas aeruginosa [TaxId:287] [46662] (4 PDB entries)
    4. 350897Species Pseudomonas stutzeri [TaxId:316] [46661] (3 PDB entries)
  6. 350901Cytochrome c552 [46636] (5 species)
    1. 350902Species Hydrogenobacter thermophilus [TaxId:940] [46640] (1 PDB entry)
    2. 350904Species Nitrosomonas europaea [TaxId:915] [46641] (2 PDB entries)
    3. 350907Species Paracoccus denitrificans [TaxId:266] [46639] (5 PDB entries)
    4. 350919Species Pseudomonas nautica [TaxId:2743] [46638] (1 PDB entry)
    5. 350928Species Thermus thermophilus [TaxId:274] [46637] (3 PDB entries)
  7. 350933Cytochrome c6 (synonym: cytochrome c553) [46628] (10 species)
    1. 350934Species Arthrospira maxima [TaxId:129910] [63457] (2 PDB entries)
    2. 350944Species Bacillus pasteurii [TaxId:1474] [46629] (5 PDB entries)
    3. 350950Species Chlamydomonas reinhardtii [TaxId:3055] [46633] (2 PDB entries)
    4. 350953Species Cyanobacterium (Synechococcus elongatus) [TaxId:32046] [46634] (1 PDB entry)
    5. 350955Species Desulfovibrio desulfuricans [TaxId:876] [46632] (1 PDB entry)
    6. 350957Species Desulfovibrio vulgaris, different strains [TaxId:881] [46631] (2 PDB entries)
    7. 350960Species Green alga (Cladophora glomerata) [TaxId:162068] [81674] (1 PDB entry)
    8. 350962Species Green alga (Scenedesmus obliquus) [TaxId:3088] [46635] (2 PDB entries)
    9. 350966Species Monoraphidium braunii [TaxId:34112] [46630] (3 PDB entries)
    10. 350970Species Red alga (Porphyra yezoensis) [TaxId:2788] [63458] (1 PDB entry)
  8. 350972Cytochrome ch [46648] (1 species)
  9. 350977Mitochondrial cytochrome c [46642] (5 species)
    1. 350978Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [46643] (34 PDB entries)
    2. 351015Species Bonito (Katsuwonus pelamis) [TaxId:8226] [46647] (1 PDB entry)
    3. 351017Species Horse (Equus caballus) [TaxId:9796] [46644] (15 PDB entries)
    4. 351034Species Rice embryos (Oryza sativa) [TaxId:4530] [46645] (1 PDB entry)
    5. 351036Species Tuna (Thunnus alalunga and Thunnus thynnus) [46646] (5 PDB entries)
  10. 351046Mono-heme c-type cytochrome ScyA [68948] (1 species)
  11. 351050Mono-heme c-type cytochrome SoxX [81675] (1 species)
  12. 351058p-Cresol methylhydroxylase, cytochrome c subunit [46669] (1 species)
    the other subunit is a flavoprotein
  13. 351064Photosystem II associated cytochrome c549 [63459] (2 species)
    1. 351065Species Arthrospira maxima [TaxId:129910] [63461] (1 PDB entry)
    2. 351068Species Synechocystis sp., pcc 6803 [TaxId:1148] [63460] (1 PDB entry)
  14. 351070SHP, an oxygen binding cytochrome c [46667] (1 species)

More info for Family a.3.1.1: monodomain cytochrome c

Timeline for Family a.3.1.1: monodomain cytochrome c: