Lineage for Family a.3.1.1: monodomain cytochrome c

  1. Root: SCOP 1.65
  2. 275720Class a: All alpha proteins [46456] (179 folds)
  3. 277141Fold a.3: Cytochrome c [46625] (1 superfamily)
    core: 3 helices; folded leaf, opened
  4. 277142Superfamily a.3.1: Cytochrome c [46626] (8 families) (S)
    covalently-bound heme completes the core
  5. 277143Family a.3.1.1: monodomain cytochrome c [46627] (13 proteins)

Proteins:

  1. 277144Cytochrome c'' [68950] (1 species)
    close homologue of SHP
  2. 277149Cytochrome c2 [46650] (8 species)
    1. 277150Species Paracoccus denitrificans [TaxId:266] [46657] (2 PDB entries)
    2. 277153Species Rhodobacter capsulatus [TaxId:1061] [46652] (2 PDB entries)
    3. 277157Species Rhodobacter sphaeroides [TaxId:1063] [46653] (5 PDB entries)
    4. 277165Species Rhodopila globiformis [TaxId:1071] [46656] (1 PDB entry)
    5. 277168Species Rhodopseudomonas palustris [TaxId:1076] [46655] (4 PDB entries)
    6. 277179Species Rhodopseudomonas viridis [TaxId:1079] [46654] (3 PDB entries)
    7. 277183Species Rhodospirillum centenum [TaxId:34018] [68947] (1 PDB entry)
    8. 277185Species Rhodospirillum rubrum [TaxId:1085] [46651] (2 PDB entries)
  3. 277188Cytochrome c5 [46658] (1 species)
  4. 277191Cytochrome c551 [46660] (4 species)
    1. 277192Species Ectothiorhodospira halophila [TaxId:17] [46664] (1 PDB entry)
    2. 277194Species Paracoccus denitrificans [TaxId:266] [46663] (3 PDB entries)
    3. 277204Species Pseudomonas aeruginosa [TaxId:287] [46662] (4 PDB entries)
    4. 277209Species Pseudomonas stutzeri [TaxId:316] [46661] (3 PDB entries)
  5. 277213Cytochrome c552 [46636] (5 species)
    1. 277214Species Hydrogenobacter thermophilus [TaxId:940] [46640] (1 PDB entry)
    2. 277216Species Nitrosomonas europaea [TaxId:915] [46641] (2 PDB entries)
    3. 277219Species Paracoccus denitrificans [TaxId:266] [46639] (5 PDB entries)
    4. 277231Species Pseudomonas nautica [TaxId:2743] [46638] (1 PDB entry)
    5. 277240Species Thermus thermophilus [TaxId:274] [46637] (3 PDB entries)
  6. 277245Cytochrome c6 (synonym: cytochrome c553) [46628] (10 species)
    1. 277246Species Arthrospira maxima [TaxId:129910] [63457] (2 PDB entries)
    2. 277256Species Bacillus pasteurii [TaxId:1474] [46629] (5 PDB entries)
    3. 277262Species Chlamydomonas reinhardtii [TaxId:3055] [46633] (2 PDB entries)
    4. 277265Species Cyanobacterium (Synechococcus elongatus) [TaxId:32046] [46634] (1 PDB entry)
    5. 277267Species Desulfovibrio desulfuricans [TaxId:876] [46632] (1 PDB entry)
    6. 277269Species Desulfovibrio vulgaris, different strains [TaxId:881] [46631] (2 PDB entries)
    7. 277272Species Green alga (Cladophora glomerata) [TaxId:162068] [81674] (1 PDB entry)
    8. 277274Species Green alga (Scenedesmus obliquus) [TaxId:3088] [46635] (2 PDB entries)
    9. 277278Species Monoraphidium braunii [TaxId:34112] [46630] (3 PDB entries)
    10. 277282Species Red alga (Porphyra yezoensis) [TaxId:2788] [63458] (1 PDB entry)
  7. 277284Cytochrome ch [46648] (1 species)
  8. 277289Mitochondrial cytochrome c [46642] (5 species)
    1. 277290Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [46643] (33 PDB entries)
    2. 277325Species Bonito (Katsuwonus pelamis) [TaxId:8226] [46647] (1 PDB entry)
    3. 277327Species Horse (Equus caballus) [TaxId:9796] [46644] (15 PDB entries)
    4. 277344Species Rice embryos (Oryza sativa) [TaxId:4530] [46645] (1 PDB entry)
    5. 277346Species Tuna (Thunnus alalunga and Thunnus thynnus) [46646] (5 PDB entries)
  9. 277356Mono-heme c-type cytochrome ScyA [68948] (1 species)
  10. 277360Mono-heme c-type cytochrome SoxX [81675] (1 species)
  11. 277368p-Cresol methylhydroxylase, cytochrome c subunit [46669] (1 species)
    the other subunit is a flavoprotein
  12. 277374Photosystem II associated cytochrome c549 [63459] (2 species)
    1. 277375Species Arthrospira maxima [TaxId:129910] [63461] (1 PDB entry)
    2. 277378Species Synechocystis sp., pcc 6803 [TaxId:1148] [63460] (1 PDB entry)
  13. 277380SHP, an oxygen binding cytochrome c [46667] (1 species)

More info for Family a.3.1.1: monodomain cytochrome c

Timeline for Family a.3.1.1: monodomain cytochrome c: