Lineage for Family a.1.1.3: Phycocyanin-like phycobilisome proteins

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 901762Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 901763Superfamily a.1.1: Globin-like [46458] (5 families) (S)
  5. 903785Family a.1.1.3: Phycocyanin-like phycobilisome proteins [46532] (7 proteins)
    oligomers of two different types of globin-like subunits containing two extra helices at the N-terminus
    binds a bilin chromophore

Proteins:

  1. 903786Allophycocyanin alpha subunit [88953] (3 species)
    1. 903787Species Mastigocladus laminosus [TaxId:83541] [88955] (1 PDB entry)
    2. 903794Species Red algae (Porphyra yezoensis) [TaxId:2788] [88956] (1 PDB entry)
    3. 903796Species Spirulina platensis [TaxId:118562] [88954] (1 PDB entry)
  2. 903798Allophycocyanin beta subunit [88957] (3 species)
    1. 903799Species Mastigocladus laminosus [TaxId:83541] [88959] (1 PDB entry)
    2. 903806Species Red algae (Porphyra yezoensis) [TaxId:2788] [88960] (1 PDB entry)
    3. 903808Species Spirulina platensis [TaxId:118562] [88958] (1 PDB entry)
  3. 903810Phycocyanin alpha subunit [88933] (8 species)
    1. 903811Species Fremyella diplosiphon [TaxId:1197] [88937] (1 PDB entry)
    2. 903814Species Red alga (Cyanidium caldarium) [TaxId:2771] [88934] (1 PDB entry)
    3. 903816Species Red alga (Polysiphonia urceolata) [TaxId:65404] [88936] (1 PDB entry)
    4. 903820Species Spirulina platensis [TaxId:118562] [88939] (2 PDB entries)
    5. 903845Species Spirulina sp. [TaxId:1157] [158219] (1 PDB entry)
    6. 903858Species Synechococcus elongatus [TaxId:32046] [88967] (1 PDB entry)
    7. 903860Species Synechococcus vulcanus [TaxId:32053] [88938] (5 PDB entries)
    8. 903866Species Thermosynechococcus elongatus [TaxId:197221] [189582] (1 PDB entry)
  4. 903868Phycocyanin beta subunit [88940] (7 species)
    1. 903869Species Fremyella diplosiphon [TaxId:1197] [88943] (1 PDB entry)
    2. 903872Species Red alga (Cyanidium caldarium) [TaxId:2771] [88941] (1 PDB entry)
    3. 903874Species Red alga (Polysiphonia urceolata) [TaxId:65404] [88942] (1 PDB entry)
    4. 903878Species Spirulina platensis [TaxId:118562] [88952] (2 PDB entries)
    5. 903903Species Synechococcus elongatus [TaxId:32046] [88968] (1 PDB entry)
    6. 903905Species Synechococcus vulcanus [TaxId:32053] [88944] (5 PDB entries)
    7. 903911Species Thermosynechococcus elongatus [TaxId:197221] [189583] (1 PDB entry)
  5. 903913Phycoerythrin alpha subunit [88961] (3 species)
    1. 903914Species Red alga (Griffithsia monilis) [TaxId:42003] [88511] (1 PDB entry)
    2. 903917Species Red alga (Polysiphonia urceolata) [TaxId:65404] [88510] (1 PDB entry)
    3. 903920Species Red algae (Gracilaria chilensis) [TaxId:2775] [88512] (1 PDB entry)
  6. 903923Phycoerythrin beta subunit [88513] (4 species)
    1. 903924Species Cryptophyte (Rhodomonas sp. CS24) [TaxId:79257] [46544] (3 PDB entries)
      Uniprot P27198
    2. 903931Species Red alga (Griffithsia monilis) [TaxId:42003] [88515] (1 PDB entry)
    3. 903934Species Red alga (Polysiphonia urceolata) [TaxId:65404] [88514] (1 PDB entry)
    4. 903937Species Red algae (Gracilaria chilensis) [TaxId:2775] [88516] (1 PDB entry)
  7. 903940automated matches [190531] (6 species)
    not a true protein
    1. 903941Species Galdieria sulphuraria [TaxId:130081] [188789] (1 PDB entry)
    2. 903944Species Gloeobacter violaceus [TaxId:33072] [188397] (4 PDB entries)
    3. 903965Species Mastigocladus laminosus [TaxId:83541] [187515] (2 PDB entries)
    4. 903970Species Red algae (Galdieria sulphuraria) [TaxId:130081] [189903] (1 PDB entry)
    5. 903973Species Red algae (Gracilaria chilensis) [TaxId:2775] [187492] (1 PDB entry)
    6. 903986Species Thermosynechococcus vulcanus [TaxId:32053] [188656] (1 PDB entry)

More info for Family a.1.1.3: Phycocyanin-like phycobilisome proteins

Timeline for Family a.1.1.3: Phycocyanin-like phycobilisome proteins: