Lineage for Family a.1.1.3: Phycocyanin-like

  1. Root: SCOP 1.63
  2. 208553Class a: All alpha proteins [46456] (171 folds)
  3. 208554Fold a.1: Globin-like [46457] (2 superfamilies)
    core: 6 helices; folded leaf, partly opened
  4. 208555Superfamily a.1.1: Globin-like [46458] (4 families) (S)
  5. 209451Family a.1.1.3: Phycocyanin-like [46532] (4 proteins)
    oligomers of two different types of homologous subunits
    each subunit contains 2 additional helices at the N-terminus
    binds a chromophore

Proteins:

  1. 209452Allophycocyanin [46537] (3 species)
    1. 209453Species Cyanobacterium (Mastigocladus laminosus) [TaxId:83541] [46539] (1 PDB entry)
    2. 209466Species Red algae (Porphyra yezoensis) [TaxId:2788] [81668] (1 PDB entry)
    3. 209469Species Spirulina platensis [TaxId:118562] [46538] (1 PDB entry)
  2. 209472Phycocyanin [46533] (5 species)
    1. 209473Species Cyanobacterium (Fremyella diplosiphon) [TaxId:1197] [46536] (1 PDB entry)
    2. 209478Species Red alga (Cyanidium caldarium) [TaxId:2771] [46534] (1 PDB entry)
    3. 209481Species Red alga (Polysiphonia urceolata) [TaxId:65404] [63442] (1 PDB entry)
    4. 209488Species Spirulina platensis [TaxId:118562] [63444] (2 PDB entries)
    5. 209537Species Synechococcus vulcanus [TaxId:32053] [63443] (2 PDB entries)
  3. 209542Phycoerythrin [46540] (5 species)
    1. 209543Species Cryptophite (Rhodomonas sp.), cs24 [46544] (1 PDB entry)
    2. 209546Species Red alga (Griffithsia monilis) [TaxId:42003] [46542] (1 PDB entry)
    3. 209551Species Red alga (Polysiphonia urceolata) [TaxId:65404] [46541] (1 PDB entry)
    4. Species Red alga (Porphyridium sordium) [46545] (1 PDB entry)
    5. 209558Species Red algae (Gracilaria chilensis) [TaxId:2775] [46543] (1 PDB entry)
  4. Phycoerythrocyanin [46546] (1 species)

More info for Family a.1.1.3: Phycocyanin-like

Timeline for Family a.1.1.3: Phycocyanin-like: