Lineage for d8dzya_ (8dzy A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2970038Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2970344Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 2970345Family d.110.3.1: PYP-like [55786] (3 proteins)
  6. 2970346Protein Photoactive yellow protein, PYP [55787] (1 species)
  7. 2970347Species Methylophilus methylotrophus, strain w3a1 [TaxId:17] [55788] (84 PDB entries)
    Uniprot P16113
  8. 3086753Domain d8dzya_: 8dzy A: [423070]
    automated match to d1nwza_
    complexed with 9ij, hc4

Details for d8dzya_

PDB Entry: 8dzy (more details), 1.01 Å

PDB Description: crystal structure of photoactive yellow protein (pyp); f96ocnf i49t construct
PDB Compounds: (A:) Photoactive yellow protein

SCOPe Domain Sequences for d8dzya_:

Sequence; same for both SEQRES and ATOM records: (download)

>d8dzya_ d.110.3.1 (A:) Photoactive yellow protein, PYP {Methylophilus methylotrophus, strain w3a1 [TaxId: 17]}
mehvafgsedientlakmddgqldglafgaiqldgdgnilqynaaegdttgrdpkqvigk
nffkdvapctdspefygkfkegvasgnlntmfeytxdyqmtptkvkvhmkkalsgdsywv
fvkrv

SCOPe Domain Coordinates for d8dzya_:

Click to download the PDB-style file with coordinates for d8dzya_.
(The format of our PDB-style files is described here.)

Timeline for d8dzya_:

  • d8dzya_ is new in SCOPe 2.08-stable