Lineage for d1bdmb2 (1bdm B:155-332)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2556795Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
    unusual fold, defines family
  4. 2556796Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families) (S)
  5. 2556797Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins)
    N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
    automatically mapped to Pfam PF02866
  6. 2557069Protein Malate dehydrogenase [56329] (12 species)
  7. 2557146Species Thermus flavus [TaxId:274] [56334] (2 PDB entries)
  8. 2557148Domain d1bdmb2: 1bdm B:155-332 [42105]
    Other proteins in same PDB: d1bdma1, d1bdmb1
    complexed with nax; mutant

Details for d1bdmb2

PDB Entry: 1bdm (more details), 1.8 Å

PDB Description: the structure at 1.8 angstroms resolution of a single site mutant (t189i) of malate dehydrogenase from thermus flavus with increased enzymatic activity
PDB Compounds: (B:) malate dehydrogenase

SCOPe Domain Sequences for d1bdmb2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1bdmb2 d.162.1.1 (B:155-332) Malate dehydrogenase {Thermus flavus [TaxId: 274]}
trldhnrakaqlakktgtgvdrirrmtvwgnhssimfpdlfhaevdgrpalelvdmewye
kvfiptvaqrgaaiiqargassaasaanaaiehirdwalgtpegdwvsmavpsqgeygip
egivysfpvtakdgayrvvegleinefarkrmeitaqelldemeqvkalgli

SCOPe Domain Coordinates for d1bdmb2:

Click to download the PDB-style file with coordinates for d1bdmb2.
(The format of our PDB-style files is described here.)

Timeline for d1bdmb2:

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Domains from same chain:
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d1bdmb1