Lineage for Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870435Family c.37.1.14: RNA helicase [52724] (7 proteins)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2870448Protein HCV helicase domain, C-terminal domain [418963] (1 species)
  7. 2870449Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [419425] (15 PDB entries)

PDB entries in Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]:

  1. Domain(s) for 1a1v:
    • 2870450Domain d1a1va2: 1a1v A:326-624 [32468]
      Other proteins in same PDB: d1a1va1
      protein/DNA complex; protein/RNA complex; complexed with so4
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1cu1:
    1. 2870474Domain d1cu1a3: 1cu1 A:326-631 [32472]
      Other proteins in same PDB: d1cu1a1, d1cu1a2, d1cu1b1, d1cu1b2
      complexed with po4, zn
      has additional subdomain(s) that are not in the common domain
    2. 2870475Domain d1cu1b3: 1cu1 B:1326-1631 [32474]
      Other proteins in same PDB: d1cu1a1, d1cu1a2, d1cu1b1, d1cu1b2
      complexed with po4, zn
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1hei:
    1. 2870451Domain d1heia2: 1hei A:326-629 [32464]
      Other proteins in same PDB: d1heia1, d1heib1
      complexed with ca
      has additional subdomain(s) that are not in the common domain
    2. 2870452Domain d1heib2: 1hei B:326-628 [32466]
      Other proteins in same PDB: d1heia1, d1heib1
      complexed with ca
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 3kqh:
    1. 2870470Domain d3kqha2: 3kqh A:326-624 [212490]
      Other proteins in same PDB: d3kqha1, d3kqhb1
      automated match to d1heia2
      protein/DNA complex

      has additional subdomain(s) that are not in the common domain
    2. 2870471Domain d3kqhb2: 3kqh B:326-624 [212492]
      Other proteins in same PDB: d3kqha1, d3kqhb1
      automated match to d1heia2
      protein/DNA complex

      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 3kqk:
    1. 2870476Domain d3kqka2: 3kqk A:326-624 [212494]
      Other proteins in same PDB: d3kqka1, d3kqkb1
      automated match to d1heia2
      protein/DNA complex

      has additional subdomain(s) that are not in the common domain
    2. 2870477Domain d3kqkb2: 3kqk B:326-624 [212496]
      Other proteins in same PDB: d3kqka1, d3kqkb1
      automated match to d1heia2
      protein/DNA complex

      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 3kql:
    1. 2870472Domain d3kqla2: 3kql A:326-624 [212498]
      Other proteins in same PDB: d3kqla1, d3kqla3, d3kqlb1, d3kqlb3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, alf, mg

      has additional subdomain(s) that are not in the common domain
    2. 2870473Domain d3kqlb2: 3kql B:326-624 [212500]
      Other proteins in same PDB: d3kqla1, d3kqla3, d3kqlb1, d3kqlb3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, alf, mg

      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 3kqn:
    • 2870455Domain d3kqna2: 3kqn A:326-624 [212502]
      Other proteins in same PDB: d3kqna1, d3kqna3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 3kqu:
    1. 2870464Domain d3kqua2: 3kqu A:326-624 [212504]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
    2. 2870465Domain d3kqub2: 3kqu B:326-624 [212506]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
    3. 2870466Domain d3kquc2: 3kqu C:326-624 [212508]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
    4. 2870467Domain d3kqud2: 3kqu D:326-624 [212510]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
    5. 2870468Domain d3kque2: 3kqu E:326-624 [212512]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
    6. 2870469Domain d3kquf2: 3kqu F:326-624 [212514]
      Other proteins in same PDB: d3kqua1, d3kqua3, d3kqub1, d3kqub3, d3kquc1, d3kquc3, d3kqud1, d3kqud3, d3kque1, d3kque3, d3kquf1, d3kquf3
      automated match to d1heia2
      protein/DNA complex; complexed with adp, bef, mn

      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 3rvb:
    • 2870457Domain d3rvba2: 3rvb A:326-630 [260021]
      Other proteins in same PDB: d3rvba1
      automated match to d1cu1a3
      complexed with cl, i79, mg

      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 4ojq:
    1. 2870458Domain d4ojqa2: 4ojq A:326-630 [237406]
      Other proteins in same PDB: d4ojqa1, d4ojqb1
      automated match to d1cu1a3
      complexed with 2sx, ca

      has additional subdomain(s) that are not in the common domain
    2. 2870459Domain d4ojqb2: 4ojq B:326-628 [237410]
      Other proteins in same PDB: d4ojqa1, d4ojqb1
      automated match to d1cu1a3
      complexed with 2sx, ca

      has additional subdomain(s) that are not in the common domain
  11. Domain(s) for 4ok3:
    1. 2870460Domain d4ok3a2: 4ok3 A:326-629 [238287]
      Other proteins in same PDB: d4ok3a1, d4ok3b1
      automated match to d4ojqa2
      complexed with 2sy, ca

      has additional subdomain(s) that are not in the common domain
    2. 2870461Domain d4ok3b2: 4ok3 B:326-628 [238285]
      Other proteins in same PDB: d4ok3a1, d4ok3b1
      automated match to d4ojqa2
      complexed with 2sy, ca

      has additional subdomain(s) that are not in the common domain
  12. Domain(s) for 4ok5:
    1. 2870453Domain d4ok5a2: 4ok5 A:326-629 [238293]
      Other proteins in same PDB: d4ok5a1, d4ok5b1
      automated match to d4ojqa2
      complexed with 2t2, ca

      has additional subdomain(s) that are not in the common domain
    2. 2870454Domain d4ok5b2: 4ok5 B:326-629 [238295]
      Other proteins in same PDB: d4ok5a1, d4ok5b1
      automated match to d4ojqa2
      complexed with 2t2, ca

      has additional subdomain(s) that are not in the common domain
  13. Domain(s) for 4ok6:
  14. Domain(s) for 4oks:
  15. Domain(s) for 8ohm:

More info for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, C-terminal domain

Timeline for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, C-terminal domain:

  • Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, C-terminal domain is new in SCOPe 2.08-stable