Lineage for Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2870435Family c.37.1.14: RNA helicase [52724] (7 proteins)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2870478Protein HCV helicase domain, N-terminal domain [418962] (1 species)
  7. 2870479Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [419424] (17 PDB entries)

PDB entries in Species: Human hepatitis C virus (HCV), different isolates [TaxId: 11103]:

  1. Domain(s) for 1a1v:
  2. Domain(s) for 1cu1:
    1. 2870506Domain d1cu1a2: 1cu1 A:187-325 [32471]
      Other proteins in same PDB: d1cu1a1, d1cu1a3, d1cu1b1, d1cu1b3
      complexed with po4, zn
    2. 2870507Domain d1cu1b2: 1cu1 B:1187-1325 [32473]
      Other proteins in same PDB: d1cu1a1, d1cu1a3, d1cu1b1, d1cu1b3
      complexed with po4, zn
  3. Domain(s) for 1hei:
    1. 2870481Domain d1heia1: 1hei A:187-325 [32463]
      Other proteins in same PDB: d1heia2, d1heib2
      complexed with ca
    2. 2870482Domain d1heib1: 1hei B:188-325 [32465]
      Other proteins in same PDB: d1heia2, d1heib2
      complexed with ca
  4. Domain(s) for 1jr6:
  5. Domain(s) for 1onb:
  6. Domain(s) for 3kqh:
    1. 2870502Domain d3kqha1: 3kqh A:189-325 [212489]
      Other proteins in same PDB: d3kqha2, d3kqhb2
      automated match to d1heia1
      protein/DNA complex
    2. 2870503Domain d3kqhb1: 3kqh B:189-325 [212491]
      Other proteins in same PDB: d3kqha2, d3kqhb2
      automated match to d1heia1
      protein/DNA complex
  7. Domain(s) for 3kqk:
    1. 2870508Domain d3kqka1: 3kqk A:189-325 [212493]
      Other proteins in same PDB: d3kqka2, d3kqkb2
      automated match to d1heia1
      protein/DNA complex
    2. 2870509Domain d3kqkb1: 3kqk B:189-325 [212495]
      Other proteins in same PDB: d3kqka2, d3kqkb2
      automated match to d1heia1
      protein/DNA complex
  8. Domain(s) for 3kql:
    1. 2870504Domain d3kqla1: 3kql A:189-325 [212497]
      Other proteins in same PDB: d3kqla2, d3kqla3, d3kqlb2, d3kqlb3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, alf, mg
    2. 2870505Domain d3kqlb1: 3kql B:189-325 [212499]
      Other proteins in same PDB: d3kqla2, d3kqla3, d3kqlb2, d3kqlb3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, alf, mg
  9. Domain(s) for 3kqn:
  10. Domain(s) for 3kqu:
    1. 2870496Domain d3kqua1: 3kqu A:189-325 [212503]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
    2. 2870497Domain d3kqub1: 3kqu B:189-325 [212505]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
    3. 2870498Domain d3kquc1: 3kqu C:189-325 [212507]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
    4. 2870499Domain d3kqud1: 3kqu D:189-325 [212509]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
    5. 2870500Domain d3kque1: 3kqu E:189-325 [212511]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
    6. 2870501Domain d3kquf1: 3kqu F:189-325 [212513]
      Other proteins in same PDB: d3kqua2, d3kqua3, d3kqub2, d3kqub3, d3kquc2, d3kquc3, d3kqud2, d3kqud3, d3kque2, d3kque3, d3kquf2, d3kquf3
      automated match to d1heia1
      protein/DNA complex; complexed with adp, bef, mn
  11. Domain(s) for 3rvb:
  12. Domain(s) for 4ojq:
    1. 2870489Domain d4ojqa1: 4ojq A:186-325 [237405]
      Other proteins in same PDB: d4ojqa2, d4ojqb2
      automated match to d1cu1a2
      complexed with 2sx, ca
    2. 2870490Domain d4ojqb1: 4ojq B:187-325 [237409]
      Other proteins in same PDB: d4ojqa2, d4ojqb2
      automated match to d1cu1a2
      complexed with 2sx, ca
  13. Domain(s) for 4ok3:
    1. 2870491Domain d4ok3a1: 4ok3 A:187-325 [238286]
      Other proteins in same PDB: d4ok3a2, d4ok3b2
      automated match to d4ojqa1
      complexed with 2sy, ca
    2. 2870492Domain d4ok3b1: 4ok3 B:187-325 [238284]
      Other proteins in same PDB: d4ok3a2, d4ok3b2
      automated match to d4ojqa1
      complexed with 2sy, ca
  14. Domain(s) for 4ok5:
    1. 2870483Domain d4ok5a1: 4ok5 A:184-325 [238292]
      Other proteins in same PDB: d4ok5a2, d4ok5b2
      automated match to d4ojqa1
      complexed with 2t2, ca
    2. 2870484Domain d4ok5b1: 4ok5 B:187-325 [238294]
      Other proteins in same PDB: d4ok5a2, d4ok5b2
      automated match to d4ojqa1
      complexed with 2t2, ca
  15. Domain(s) for 4ok6:
    1. 2870494Domain d4ok6a1: 4ok6 A:185-325 [237407]
      Other proteins in same PDB: d4ok6b2
      automated match to d1cu1a2
      complexed with 2t7, ca
    2. 2870495Domain d4ok6b1: 4ok6 B:187-325 [238288]
      Other proteins in same PDB: d4ok6b2
      automated match to d4ojqa1
      complexed with 2t7, ca
  16. Domain(s) for 4oks:
    1. 2870486Domain d4oksa1: 4oks A:184-325 [237408]
      Other proteins in same PDB: d4oksb2
      automated match to d1cu1a2
      complexed with 2t9, ca
    2. 2870487Domain d4oksb1: 4oks B:187-325 [238290]
      Other proteins in same PDB: d4oksb2
      automated match to d4ojqa1
      complexed with 2t9, ca
  17. Domain(s) for 8ohm:

More info for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, N-terminal domain

Timeline for Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, N-terminal domain:

  • Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] from c.37.1.14 HCV helicase domain, N-terminal domain is new in SCOPe 2.08-stable