SCOP 1.61: Domain d1ckmb2: 1ckm B:11-238

Lineage for d1ckmb2 (1ckm B:11-238)

1. Root: SCOP 1.61

2. Class d: Alpha and beta proteins (a+b) [53931] (212 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)

4. Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (3 families)

5. Family d.142.2.3: RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain [56100] (1 protein)

6. Protein RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain [56101] (1 species)

7. Species Chlorella virus, PBCV-1 [56102] (3 PDB entries)

8. Domain d1ckmb2: 1ckm B:11-238 [41586]
   Other proteins in same PDB: d1ckma1, d1ckmb1

Details for d1ckmb2

PDB Entry: 1ckm, 2.5 Å

PDB Description: structure of two different conformations of mrna capping enzyme in complex with gtp

SCOP Domain Sequences for d1ckmb2:

Sequence; same for both SEQRES and ATOM records:

>d1ckmb2 d.142.2.3 (B:11-238) RNA guanylyltransferase (mRNA capping enzyme), N-terminal domain {Chlorella virus, PBCV-1}
nitteravltlnglqiklhkvvgesrddivakmkdlamddhkfprlpgpnpvsierkdfe
klkqnkyvvsektdgirfmmfftrvfgfkvctiidramtvyllpfkniprvlfqgsifdg
elcvdivekkfafvlfdavvvsgvtvsqmdlasrffamkrslkefknvpedpailrykew
iplehptiikdhlkkanaiyhtdgliimsvdepviygrnfnlfklkpg

Timeline for d1ckmb2:

• d1ckmb2 first appeared (with stable ids) in SCOP 1.55
  
• d1ckmb2 appears in SCOP 1.59
  
• d1ckmb2 appears in SCOP 1.63
  
• d1ckmb2 appears in the current release, SCOPe 2.08