Lineage for d4qqya4 (4qqy A:823-944)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3012359Fold d.401: Cas3 C-terminal domain-like [418727] (1 superfamily)
    3 layers; central antiparallel beta strands surrounded by several helices and loops
  4. 3012360Superfamily d.401.1: Cas3 C-terminal domain-like [418770] (1 family) (S)
  5. 3012361Family d.401.1.1: Cas3 C-terminal domain-like [418855] (1 protein)
    Pfam PF18395
  6. 3012362Protein CRISPR-associated protein Cas3 [419204] (1 species)
  7. 3012363Species Thermobifida fusca [TaxId:269800] [419717] (3 PDB entries)
  8. 3012372Domain d4qqya4: 4qqy A:823-944 [414193]
    Other proteins in same PDB: d4qqya1, d4qqya2, d4qqya3, d4qqyc1, d4qqyc2, d4qqyc3, d4qqye1, d4qqye2, d4qqye3, d4qqyg1, d4qqyg2, d4qqyg3
    automated match to d4qqwa4
    protein/DNA complex; complexed with adp, fe

Details for d4qqya4

PDB Entry: 4qqy (more details), 3.12 Å

PDB Description: Crystal structure of T. fusca Cas3-ADP
PDB Compounds: (A:) CRISPR-associated helicase, Cas3 family

SCOPe Domain Sequences for d4qqya4:

Sequence, based on SEQRES records: (download)

>d4qqya4 d.401.1.1 (A:823-944) CRISPR-associated protein Cas3 {Thermobifida fusca [TaxId: 269800]}
hvlatrfgagsvrvlcyyvdtagnrwldpectvefpeqgtgregrftmadcrdlvartip
vrmgpwasqltednhppeawresfylrdlvlipqrvtdegavlptetggrewlldpckgl
if

Sequence, based on observed residues (ATOM records): (download)

>d4qqya4 d.401.1.1 (A:823-944) CRISPR-associated protein Cas3 {Thermobifida fusca [TaxId: 269800]}
hvlatrfgagsvrvlcyyvdtagnrwldpectvefpeqgtegrftmadcrdlvartipvr
mgpwasqltednhppeawresfylrdlvlipqrvtdvlptetggrewlldpckglif

SCOPe Domain Coordinates for d4qqya4:

Click to download the PDB-style file with coordinates for d4qqya4.
(The format of our PDB-style files is described here.)

Timeline for d4qqya4:

  • d4qqya4 is new in SCOPe 2.08-stable