Lineage for d3jcla2 (3jcl A:15-284)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778274Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2778275Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. 2780602Family b.29.1.26: Coronavirus spike glycoprotein S1, N-terminal domain [418798] (2 proteins)
    Pfam PF16451
  6. 2780603Protein Coronavirus spike glycoprotein S1 [419101] (4 species)
  7. 2780612Species Murine hepatitis virus (strain a59) [TaxID:11142] [419612] (1 PDB entry)
  8. 2780613Domain d3jcla2: 3jcl A:15-284 [413257]
    Other proteins in same PDB: d3jcla1, d3jcla3, d3jcla4

Details for d3jcla2

PDB Entry: 3jcl (more details), 4 Å

PDB Description: cryo-electron microscopy structure of a coronavirus spike glycoprotein trimer
PDB Compounds: (A:) Spike glycoprotein

SCOPe Domain Sequences for d3jcla2:

Sequence; same for both SEQRES and ATOM records: (download)

>d3jcla2 b.29.1.26 (A:15-284) Coronavirus spike glycoprotein S1 {Murine hepatitis virus (strain a59) [TaxID:11142]}
yigdfrciqlvnsnganvsapsistetvevsqglgtyyvldrvylnatllltgyypvdgs
kfrnlalrgtnsvslswfqppylnqfndgifakvqnlktstpsgatayfptivigslfgy
tsytvviepyngvimasvcqyticqlpytdckpntngnkligfwhtdvkppicvlkrnft
lnvnadafyfhfyqhggtfyayyadkpsattflfsvyigdiltqyyvlpficnptagstf
aprywvtplvkrqylfnfnqkgvitsavdc

SCOPe Domain Coordinates for d3jcla2:

Click to download the PDB-style file with coordinates for d3jcla2.
(The format of our PDB-style files is described here.)

Timeline for d3jcla2:

  • d3jcla2 is new in SCOPe 2.08-stable