Lineage for d7nxaa_ (7nxa A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2739518Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2739519Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2742100Protein automated matches [190119] (24 species)
    not a true protein
  7. 2742214Species Human (Homo sapiens) [TaxId:9606] [188740] (709 PDB entries)
  8. 2742744Domain d7nxaa_: 7nxa A: [412654]
    Other proteins in same PDB: d7nxab2, d7nxae_, d7nxal1, d7nxal2
    automated match to d6shgh_
    complexed with gol, nag, peg, so4

Details for d7nxaa_

PDB Entry: 7nxa (more details), 2.5 Å

PDB Description: crystal structure of the receptor binding domain of sars-cov-2 b.1.351 variant spike glycoprotein in complex with covox-222 and ey6a fabs
PDB Compounds: (A:) COVOX-222 Fab heavy chain

SCOPe Domain Sequences for d7nxaa_:

Sequence, based on SEQRES records: (download)

>d7nxaa_ b.1.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvesgggliqpggslrlscaasgltvssnymswvrqapgkglewvsviysggstfya
dsvkgrftisrdnskntlylqmnslgaedtavyycargegspgnwfdpwgqgtlvtvssa
stkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssg
lyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepk

Sequence, based on observed residues (ATOM records): (download)

>d7nxaa_ b.1.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
evqlvesgggliqpggslrlscaasgltvssnymswvrqapgkglewvsviysggstfya
dsvkgrftisrdnskntlylqmnslgaedtavyycargegspgnwfdpwgqgtlvtvssa
stkgpsvfplapsgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglyslss
vvtvpssslgtqtyicnvnhkpsntkvdkkvepk

SCOPe Domain Coordinates for d7nxaa_:

Click to download the PDB-style file with coordinates for d7nxaa_.
(The format of our PDB-style files is described here.)

Timeline for d7nxaa_:

  • d7nxaa_ is new in SCOPe 2.08-stable