Lineage for d6j11c_ (6j11 C:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778274Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2778275Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. 2780602Family b.29.1.26: Coronavirus spike glycoprotein S1, N-terminal domain [418798] (2 proteins)
    Pfam PF16451
  6. 2780603Protein Coronavirus spike glycoprotein S1 [419101] (4 species)
  7. 2780604Species MERS-CoV coronavirus [TaxId:1335626] [419732] (2 PDB entries)
  8. 2780608Domain d6j11c_: 6j11 C: [411329]
    Other proteins in same PDB: d6j11d_, d6j11e_, d6j11f_, d6j11g_, d6j11h1, d6j11h2, d6j11l_
    automated match to d5x4ra_
    complexed with nag

Details for d6j11c_

PDB Entry: 6j11 (more details), 3 Å

PDB Description: mers-cov spike n-terminal domain and 7d10 scfv complex
PDB Compounds: (C:) N-terminal domain of Spike glycoprotein

SCOPe Domain Sequences for d6j11c_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6j11c_ b.29.1.26 (C:) Coronavirus spike glycoprotein S1 {MERS-CoV coronavirus [TaxId: 1335626]}
yvdvgpdsvksacievdiqqtffdktwprpidvskadgiiypqgrtysnitityqglfpy
qgdhgdmyvysaghatgttpqklfvanysqdvkqfangfvvrigaaanstgtviispsts
atirkiypafmlgssvgnfsdgkmgrffnhtlvllpdgcgtllrafycileprsgnhcpa
gnsytsfatyhtpatdcsdgnynrnaslnsfkeyfnlrnctfmytynitedeilewfgit
qtaqgvhlfssryvdlyggnmfqfatlpvydtikyysiiphsirsiqsdrkawaafyvyk
lqpltflldfsvdgyirraidcgfndlsqlhcsyes

SCOPe Domain Coordinates for d6j11c_:

Click to download the PDB-style file with coordinates for d6j11c_.
(The format of our PDB-style files is described here.)

Timeline for d6j11c_:

  • d6j11c_ is new in SCOPe 2.08-stable