SCOPe 2.08: Domain d5dd3h1: 5dd3 H:6-214

Lineage for d5dd3h1 (5dd3 H:6-214)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.0: automated matches [191470] (1 protein)
   not a true family

6. Protein automated matches [190740] (31 species)
   not a true protein

7. Species Rhesus monkey (Macaca mulatta) [TaxId:9544] [226133] (37 PDB entries)

8. Domain d5dd3h1: 5dd3 H:6-214 [409935]
   Other proteins in same PDB: d5dd3h2
   automated match to d6shgh_

Details for d5dd3h1

PDB Entry: 5dd3, 1.8 Å

PDB Description: crystal structures in an anti-hiv antibody lineage from immunization of rhesus macaques

PDB Compounds: (H:) anti-hiv antibody dh570.4 fab heavy chain

SCOPe Domain Sequences for d5dd3h1:

Sequence, based on SEQRES records:

>d5dd3h1 b.1.1.0 (H:6-214) automated matches {Rhesus monkey (Macaca mulatta) [TaxId: 9544]}
esgpglvkpsetlsvtcavsgvsfssfwwgwirqspgkglewigtiygssgrgeynpslk
srttisrdtsksqisleltsvtaadtaiyycsrglfqpngfsftltsywfdvwgpgvpvt
vssastkgpsvfplapssrstsestaalgclvkdyfpepvtvswnsgsltsgvhtfpavl
qssglyslssvvtvpssslgtqtyvcnvnhkpsntkvdkrveik

Sequence, based on observed residues (ATOM records):

>d5dd3h1 b.1.1.0 (H:6-214) automated matches {Rhesus monkey (Macaca mulatta) [TaxId: 9544]}
esgpglvkpsetlsvtcavsgvsfssfwwgwirqspgkglewigtiygssgrgeynpslk
srttisrsqisleltsvtaadtaiyycsrglfqpngfsftltsywfdvwgpgvpvtvssa
stkgpsvfplapstsestaalgclvkdyfpepvtvswnsgsltsgvhtfpavlqssglys
lssvvtvpssslgtqtyvcnvnhkpsntkvdkrveik

Timeline for d5dd3h1:

• d5dd3h1 is new in SCOPe 2.08-stable