SCOPe 2.08: Domain d3v4vh1: 3v4v H:6-218

Lineage for d3v4vh1 (3v4v H:6-218)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

6. Protein automated matches [190119] (24 species)
   not a true protein

7. Species Mouse (Mus musculus) [TaxId:10090] [186842] (622 PDB entries)

8. Domain d3v4vh1: 3v4v H:6-218 [408736]
   Other proteins in same PDB: d3v4vh2, d3v4vl2, d3v4vm2, d3v4vn2
   automated match to d6shgh_
   complexed with 0du, ca, mg, nag, trs

Details for d3v4vh1

PDB Entry: 3v4v, 3.1 Å

PDB Description: crystal structure of a4b7 headpiece complexed with fab act-1 and ro0505376

PDB Compounds: (H:) MONOCLONAL ANTIBODY Act-1 HEAVY CHAIN

SCOPe Domain Sequences for d3v4vh1:

Sequence, based on SEQRES records:

>d3v4vh1 b.1.1.1 (H:6-218) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qpgaelvkpgtsvklsckgygytftsywmhwvkqrpgqglewigeidpsesntnynqkfk
gkatltvdissstaymqlssltsedsavyycarggydgwdyaidywgqgtsvtvssaktt
ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlesdlytl
sssvtvpssprpsetvtcnvahpasstkvdkki

Sequence, based on observed residues (ATOM records):

>d3v4vh1 b.1.1.1 (H:6-218) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
qpgaelvkpgtsvklsckgygytftsywmhwvkqrpgqglewigeidpsesntnynqkfk
gkatltvdissstaymqlssltsedsavyycarggydgwdyaidywgqgtsvtvssaktt
ppsvyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlesdlytlsssvtvp
ssprpsetvtcnvahpasstkvdkki

Timeline for d3v4vh1:

• d3v4vh1 is new in SCOPe 2.08-stable