Lineage for d5s55f2 (5s55 F:77-378)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2585054Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2585055Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families) (S)
  5. 2585417Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
    Pfam PF03133; PubMed 22020298
  6. 2585418Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)
  7. 2585419Species Chicken (Gallus gallus) [TaxId:9031] [311385] (158 PDB entries)
  8. 2585444Domain d5s55f2: 5s55 F:77-378 [406452]
    Other proteins in same PDB: d5s55a1, d5s55a2, d5s55b1, d5s55b2, d5s55c1, d5s55c2, d5s55d1, d5s55d2, d5s55e_, d5s55f1, d5s55f3
    automated match to d3tiia2
    complexed with acp, ca, gdp, gtp, mg, wzp

Details for d5s55f2

PDB Entry: 5s55 (more details), 2.3 Å

PDB Description: tubulin-z106307058-complex
PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5s55f2:

Sequence, based on SEQRES records: (download)

>d5s55f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records): (download)

>d5s55f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnltderevflaaynrrregregnvwiakssgil
isseaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniylyregvl
rtssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdalnttlen
sillqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievngapacaqk
lyaelcqgivdvaissvfplaptsifikl

SCOPe Domain Coordinates for d5s55f2:

Click to download the PDB-style file with coordinates for d5s55f2.
(The format of our PDB-style files is described here.)

Timeline for d5s55f2: