SCOPe 2.08: Domain d7av6a1: 7av6 A:25-125

Lineage for d7av6a1 (7av6 A:25-125)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.110: Profilin-like [55769] (10 superfamilies)
   core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha

4. Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families)
   alpha-beta(2)-alpha(2)-beta(3)

5. Family d.110.3.1: PYP-like [55786] (3 proteins)

6. Protein Photoactive yellow protein, PYP [55787] (1 species)

7. Species Methylophilus methylotrophus, strain w3a1 [TaxId:17] [55788] (84 PDB entries)
   Uniprot P16113

8. Domain d7av6a1: 7av6 A:25-125 [404411]
   Other proteins in same PDB: d7av6a2
   automated match to d2i9va_
   complexed with fmt

Details for d7av6a1

PDB Entry: 7av6, 1.5 Å

PDB Description: fast in a domain-swapped dimer form

PDB Compounds: (A:) Photoactive yellow protein

SCOPe Domain Sequences for d7av6a1:

Sequence, based on SEQRES records:

>d7av6a1 d.110.3.1 (A:25-125) Photoactive yellow protein, PYP {Methylophilus methylotrophus, strain w3a1 [TaxId: 17]}
glafgaiqldgdgnilqynaaegditgrdpkqvigknffkdvapgtdspefygkfkegva
sgnlntmfewmiptsrgptkvkvhmkkalsgdsywvfvkrv

Sequence, based on observed residues (ATOM records):

>d7av6a1 d.110.3.1 (A:25-125) Photoactive yellow protein, PYP {Methylophilus methylotrophus, strain w3a1 [TaxId: 17]}
glafgaiqldgdgnilqynaditgrdpkqvigknffkdvapgtdspefygkfkegvasgn
lntmfewmiptsrgptkvkvhmkkalsgdsywvfvkrv

Timeline for d7av6a1:

• d7av6a1 first appeared in SCOPe 2.07