SCOPe 2.07: Domain d6yk1a_: 6yk1 A:

Lineage for d6yk1a_ (6yk1 A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.1: Ribokinase-like [53613] (6 families)
   has extra strand located between strands 2 and 3

5. Family c.72.1.5: PfkB-like kinase [82515] (3 proteins)
   includes a variety of carbohydrate and pyrimidine kinases

6. Protein automated matches [190479] (4 species)
   not a true protein

7. Species Mus musculus [TaxId:10090] [404147] (3 PDB entries)

8. Domain d6yk1a_: 6yk1 A: [404247]
   automated match to d1rfua_
   complexed with ags, d95, edo, gol, pg4

Details for d6yk1a_

PDB Entry: 6yk1, 2.4 Å

PDB Description: crystal structure of mouse pyridoxal kinase in complex with atp-gamma- s and artesunate

PDB Compounds: (A:) Pyridoxal kinase

SCOPe Domain Sequences for d6yk1a_:

Sequence, based on SEQRES records:

>d6yk1a_ c.72.1.5 (A:) automated matches {Mus musculus [TaxId: 10090]}
ecrvlsiqshvvrgyvgnraamfplqvlgfevdavnsvqfsnhtgyahwkgqvlksqelh
elyeglkvndvnkydyvltgytrdksflamvvdivrelkqqnsrlvyvcdpvmgdkwnge
gsmyvpqdllpvyrdkvvpvadiitpnqfeaellsgrkihsqeeafevmdmlhcmgpdtv
vitssdlpssqgsdylialgsqrmrkpdgstvtqrirmemrkveavfvgtgdlfaamlla
wthkhpdnlkvacektvsamqhvlqrtircakaeagegqkpspaqlelrmvqskrdiedp
eivvqatvl

Sequence, based on observed residues (ATOM records):

>d6yk1a_ c.72.1.5 (A:) automated matches {Mus musculus [TaxId: 10090]}
ecrvlsiqshvvrgyvgnraamfplqvlgfevdavnsvqfsnhtgyahwkgqvlksqelh
elyeglkvndvnkydyvltgytrdksflamvvdivrelkqqnsrlvyvcdpvmgdkgsmy
vpqdllpvyrdkvvpvadiitpnqfeaellsgrkihsqeeafevmdmlhcmgpdtvvits
sdlpssqgsdylialgsqrmrkpdgstvtqrirmemrkveavfvgtgdlfaamllawthk
hpdnlkvacektvsamqhvlqrtircakaeagegqkpspaqlelrmvqskrdiedpeivv
qatvl

Timeline for d6yk1a_:

• d6yk1a_ is new in SCOPe 2.07-stable
  
• d6yk1a_ appears in the current release, SCOPe 2.08