SCOPe 2.07: Domain d6yjfa1: 6yjf A:2-416

Lineage for d6yjfa1 (6yjf A:2-416)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.86: Phosphoglycerate kinase [53747] (1 superfamily)
   consists of two non-similar domains, 3 layers (a/b/a) each
   Domain 1 has parallel beta-sheet of 6 strands, order 342156
   Domain 2 has parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.86.1: Phosphoglycerate kinase [53748] (2 families)

5. Family c.86.1.1: Phosphoglycerate kinase [53749] (2 proteins)
   Domain 2 binds ATP
   automatically mapped to Pfam PF00162

6. Protein automated matches [190709] (5 species)
   not a true protein

7. Species Plasmodium vivax [TaxId:5855] [381605] (3 PDB entries)

8. Domain d6yjfa1: 6yjf A:2-416 [404172]
   Other proteins in same PDB: d6yjfa2
   automated match to d1qpga_
   complexed with gol, otq

Details for d6yjfa1

PDB Entry: 6yjf, 1.85 Å

PDB Description: plasmoodium vivax phosphoglycerate kinase bound to nitrofuran inhibitor from pegsmear at ph 6.5

PDB Compounds: (A:) phosphoglycerate kinase

SCOPe Domain Sequences for d6yjfa1:

Sequence; same for both SEQRES and ATOM records:

>d6yjfa1 c.86.1.1 (A:2-416) automated matches {Plasmodium vivax [TaxId: 5855]}
lgnklsitdvkaiqgkkvlvrvdfnvpiengvikdtnritatlptihhlkkegaakiili
shcgrpdgtknlkytlkpvaetlgtllgeevlflsdcvgeevaaqinqakdnsvillenl
rfhveeegkgvdaagnkikaskedmekfqneltklgdvfindafgtahrahssmvgikmn
vkasgflmkkeleyfskalenpqrpllailggakvsdkiqliknlldkvdkmiigggmay
tfkyvlnnmkigdslfdeagskivneimekakaknveiylpvdfkvadkfdnnantkvvt
deegiedkwmgldagpksienykdvilssktiiwngpqgvfempnfakgsieclnlviea
tkkgaisivgggdtaslveqqqkkneishvstgggaslellegkelpgvvalssk

Timeline for d6yjfa1:

• d6yjfa1 is new in SCOPe 2.07-stable
  
• d6yjfa1 appears in the current release, SCOPe 2.08