SCOPe 2.08: Domain d6m0td2: 6m0t D:229-581

Lineage for d6m0td2 (6m0t D:229-581)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (24 species)
   not a true protein

7. Species Plasmodium falciparum [TaxId:36329] [234567] (7 PDB entries)

8. Domain d6m0td2: 6m0t D:229-581 [403658]
   Other proteins in same PDB: d6m0ta1, d6m0tb1, d6m0tc1, d6m0td1
   automated match to d3bjua2
   protein/RNA complex; complexed with ez3, lys

Details for d6m0td2

PDB Entry: 6m0t, 2.68 Å

PDB Description: crystal structure of lysyl-trna synthetase from plasmodium falciparum complexed with l-lysine and cladosporin derivative (cl-2)

PDB Compounds: (D:) Lysine--tRNA ligase

SCOPe Domain Sequences for d6m0td2:

Sequence, based on SEQRES records:

>d6m0td2 d.104.1.0 (D:229-581) automated matches {Plasmodium falciparum [TaxId: 36329]}
dteiryrqryldllinessrhtfvtrtkiinflrnflnergffevetpmmnliagganar
pfithhndldldlylriatelplkmlivggidkvyeigkvfrnegidnthnpeftscefy
wayadyndlikwsedffsqlvyhlfgtykisynkdgpenqpieidftppypkvsiveeie
kvtntileqpfdsnetiekminiikehkielpnpptaaklldqlashfienkyndkpffi
vehpqimsplakyhrtkpglterlemficgkevlnaytelndpfkqkecfklqqkdrekg
dteaaqldsafctsleyglpptgglglgidritmfltnknsikdvilfptmrp

Sequence, based on observed residues (ATOM records):

>d6m0td2 d.104.1.0 (D:229-581) automated matches {Plasmodium falciparum [TaxId: 36329]}
dteiryrqryldllinessrhtfvtrtkiinflrnflnergffevetpmmnliagganar
pfithhndldldlylriatelplkmlivggidkvyeigkvfrnegidnthnpeftscefy
wayadyndlikwsedffsqlvyhlfgtykisynkdgpenqpieidftppypkvsiveeie
kvtntileqpfdsnetiekminiikehkielpnpptaaklldqlashfienkyndkpffi
vehpqimsplakyhrtkpglterlemficgkevlnaytelndpfkqkecfqldsafctsl
eyglpptgglglgidritmfltnknsikdvilfptmrp

Timeline for d6m0td2:

• d6m0td2 first appeared in SCOPe 2.07