Lineage for d7lopa_ (7lop A:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010708Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 3010709Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 3010710Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
    part of PfamB PB000266
  6. 3010711Protein Spike protein S1 [143589] (5 species)
  7. 3010746Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (118 PDB entries)
  8. 3010782Domain d7lopa_: 7lop A: [399708]
    Other proteins in same PDB: d7lopb_, d7lopc1, d7lopc2, d7lopl1, d7lopl2, d7lopv1, d7lopv2, d7lopw_, d7lopy1, d7lopy2
    automated match to d2dd8s1
    complexed with nag

Details for d7lopa_

PDB Entry: 7lop (more details), 2.25 Å

PDB Description: crystal structure of sars-cov-2 receptor binding domain in complex with antibodies cv05-163 and cr3022
PDB Compounds: (A:) Spike protein S1

SCOPe Domain Sequences for d7lopa_:

Sequence; same for both SEQRES and ATOM records: (download)

>d7lopa_ d.318.1.1 (A:) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
tnlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcf
tnvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyl
yrlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvv
lsfellhapatvcgp

SCOPe Domain Coordinates for d7lopa_:

Click to download the PDB-style file with coordinates for d7lopa_.
(The format of our PDB-style files is described here.)

Timeline for d7lopa_: