Lineage for d7kmic1 (7kmi C:334-527)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3010708Fold d.318: SARS receptor-binding domain-like [143586] (1 superfamily)
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. 3010709Superfamily d.318.1: SARS receptor-binding domain-like [143587] (1 family) (S)
    automatically mapped to Pfam PF09408
  5. 3010710Family d.318.1.1: SARS receptor-binding domain-like [143588] (2 proteins)
    part of PfamB PB000266
  6. 3010711Protein Spike protein S1 [143589] (5 species)
  7. 3010746Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [382292] (118 PDB entries)
  8. 3010751Domain d7kmic1: 7kmi C:334-527 [399399]
    Other proteins in same PDB: d7kmia1, d7kmia2, d7kmib1, d7kmib2, d7kmic2
    automated match to d2dd8s1
    complexed with gol, nag

Details for d7kmic1

PDB Entry: 7kmi (more details), 1.73 Å

PDB Description: ly-cov481 neutralizing antibody against sars-cov-2
PDB Compounds: (C:) Spike protein S1

SCOPe Domain Sequences for d7kmic1:

Sequence; same for both SEQRES and ATOM records: (download)

>d7kmic1 d.318.1.1 (C:334-527) Spike protein S1 {Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]}
nlcpfgevfnatrfasvyawnrkrisncvadysvlynsasfstfkcygvsptklndlcft
nvyadsfvirgdevrqiapgqtgkiadynyklpddftgcviawnsnnldskvggnynyly
rlfrksnlkpferdisteiyqagstpcngvegfncyfplqsygfqptngvgyqpyrvvvl
sfellhapatvcgp

SCOPe Domain Coordinates for d7kmic1:

Click to download the PDB-style file with coordinates for d7kmic1.
(The format of our PDB-style files is described here.)

Timeline for d7kmic1: