SCOPe 2.07: Domain d1dt9a2: 1dt9 A:277-422

Lineage for d1dt9a2 (1dt9 A:277-422)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.79: Bacillus chorismate mutase-like [55297] (9 superfamilies)
   core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest

4. Superfamily d.79.3: L30e-like [55315] (4 families)

5. Family d.79.3.2: ERF1/Dom34 C-terminal domain-like [55323] (3 proteins)
   automatically mapped to Pfam PF03465

6. Protein C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 [55324] (1 species)
   contains a large insertion forming a separate (sub)domain

7. Species Human (Homo sapiens) [TaxId:9606] [55325] (1 PDB entry)

8. Domain d1dt9a2: 1dt9 A:277-422 [39815]
   Other proteins in same PDB: d1dt9a1, d1dt9a3

Details for d1dt9a2

PDB Entry: 1dt9, 2.7 Å

PDB Description: the crystal structure of human eukaryotic release factor erf1-mechanism of stop codon recognition and peptidyl-trna hydrolysis

PDB Compounds: (A:) protein (eukaryotic peptide chain release factor subunit 1)

SCOPe Domain Sequences for d1dt9a2:

Sequence, based on SEQRES records:

>d1dt9a2 d.79.3.2 (A:277-422) C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 {Human (Homo sapiens) [TaxId: 9606]}
nvkfiqekkligryfdeisqdtgkycfgvedtlkalemgaveilivyenldimryvlhcq
gteeekilyltpeqekdkshftdketgqeheliesmpllewfannykkfgatleivtdks
qegsqfvkgfggiggilryrvdfqgm

Sequence, based on observed residues (ATOM records):

>d1dt9a2 d.79.3.2 (A:277-422) C-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 {Human (Homo sapiens) [TaxId: 9606]}
nvkfiqekkligryfdeisqdtgkycfgvedtlkalemgaveilivyenldimryvlily
ltpeqekdkshftesmpllewfannykkfgatleivtdksqegsqfvkgfggiggilryr
vdfqgm

Timeline for d1dt9a2:

• d1dt9a2 first appeared (with stable ids) in SCOP 1.55
  
• d1dt9a2 appears in SCOPe 2.06
  
• d1dt9a2 appears in the current release, SCOPe 2.08