SCOPe 2.07: Domain d1fnma4: 1fnm A:404-482

Lineage for d1fnma4 (1fnm A:404-482)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.11: EF-G C-terminal domain-like [54980] (4 families)

5. Family d.58.11.1: EF-G/eEF-2 domains III and V [54981] (3 proteins)
   domain III structure is lacking some of the superfamily characters and is often disordered in crystals

6. Protein Elongation factor G (EF-G) [54982] (2 species)
   domain III is seen in 1FNM but disordered in the most of other PDB entries

7. Species Thermus thermophilus [TaxId:274] [54983] (9 PDB entries)

8. Domain d1fnma4: 1fnm A:404-482 [39302]
   Other proteins in same PDB: d1fnma1, d1fnma2, d1fnma3
   complexed with gdp, mg

Details for d1fnma4

PDB Entry: 1fnm, 2.8 Å

PDB Description: structure of thermus thermophilus ef-g h573a

PDB Compounds: (A:) Elongation factor G

SCOPe Domain Sequences for d1fnma4:

Sequence; same for both SEQRES and ATOM records:

>d1fnma4 d.58.11.1 (A:404-482) Elongation factor G (EF-G) {Thermus thermophilus [TaxId: 274]}
vpepvidvaiepktkadqeklsqalarlaeedptfrvsthpetgqtiisgmgelhleiiv
drlkrefkvdanvgkpqva

Timeline for d1fnma4:

• d1fnma4 first appeared (with stable ids) in SCOP 1.55
  
• d1fnma4 appears in SCOPe 2.06
  
• d1fnma4 appears in the current release, SCOPe 2.08