Lineage for d6tj9b2 (6tj9 B:333-527)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2445862Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2445863Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2446486Family c.36.1.0: automated matches [227300] (1 protein)
    not a true family
  6. 2446487Protein automated matches [227126] (21 species)
    not a true protein
  7. 2446560Species Escherichia coli [TaxId:83333] [324640] (4 PDB entries)
  8. 3089062Domain d6tj9b2: 6tj9 B:333-527 [389124]
    Other proteins in same PDB: d6tj9a1, d6tj9a3, d6tj9a4, d6tj9b1, d6tj9b3, d6tj9b4
    automated match to d1qgda1
    complexed with 5sp, ca, edo, na, ndq

Details for d6tj9b2

PDB Entry: 6tj9 (more details), 0.95 Å

PDB Description: escherichia coli transketolase in complex with cofactor analog 2'- methoxythiamine and substrate xylulose 5-phosphate
PDB Compounds: (B:) Transketolase 1

SCOPe Domain Sequences for d6tj9b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d6tj9b2 c.36.1.0 (B:333-527) automated matches {Escherichia coli [TaxId: 83333]}
mpsdfdakakefiaklqanpakiasrkasqnaieafgpllpeflggsadlapsnltlwsg
skainedaagnyihygvrefgmtaiangislhggflpytstflmfveyarnavrmaalmk
qrqvmvythdsiglgedgpthqpveqvaslrvtpnmstwrpcdqvesavawkygverqdg
ptalilsrqnlaqqe

SCOPe Domain Coordinates for d6tj9b2:

Click to download the PDB-style file with coordinates for d6tj9b2.
(The format of our PDB-style files is described here.)

Timeline for d6tj9b2:

  • d6tj9b2 is new in SCOPe 2.07-stable