Lineage for d6w9rp1 (6w9r P:1-75)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 3088644Domain d6w9rp1: 6w9r P:1-75 [388706]
    Other proteins in same PDB: d6w9rm2, d6w9rn2, d6w9ro2, d6w9rp2, d6w9rq2, d6w9rr2, d6w9rs2, d6w9rt2, d6w9ru2, d6w9rv2, d6w9rw2, d6w9rx2
    automated match to d5ibkc_
    complexed with flc

Details for d6w9rp1

PDB Entry: 6w9r (more details), 1.82 Å

PDB Description: crystal structure of an otu deubiquitinase from wolbachia pipientis wmel bound to ubiquitin
PDB Compounds: (P:) Ubiquitin

SCOPe Domain Sequences for d6w9rp1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6w9rp1 d.15.1.1 (P:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

SCOPe Domain Coordinates for d6w9rp1:

Click to download the PDB-style file with coordinates for d6w9rp1.
(The format of our PDB-style files is described here.)

Timeline for d6w9rp1:

  • d6w9rp1 is new in SCOPe 2.07-stable