Lineage for d6w9dd1 (6w9d D:2-147)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2507728Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2507729Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2507730Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. 2507738Protein Ubiquitin conjugating enzyme, UBC [54497] (34 species)
  7. 2507884Species Human (Homo sapiens), ubch5b [TaxId:9606] [102841] (24 PDB entries)
    Uniprot P62837
    E2-17 kDa 2
  8. 3085883Domain d6w9dd1: 6w9d D:2-147 [385945]
    Other proteins in same PDB: d6w9da2, d6w9dc_, d6w9dd2, d6w9df_, d6w9dg2, d6w9di_
    automated match to d5d0ma_
    complexed with iod, zn

Details for d6w9dd1

PDB Entry: 6w9d (more details), 3.19 Å

PDB Description: rnf12 ring domain in complex with a ube2d2~ub conjugate
PDB Compounds: (D:) ubiquitin-conjugating enzyme e2 d2

SCOPe Domain Sequences for d6w9dd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6w9dd1 d.20.1.1 (D:2-147) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch5b [TaxId: 9606]}
alkrihkelndlardppaqsragpvgddmfhwqatimgpndspyqggvffltihfptdyp
fkppkvafttriyhpninsngsikldilrsqwspaltiskvllsissllsdpnpddplvp
eiariyktdrekynriarewtqkyam

SCOPe Domain Coordinates for d6w9dd1:

Click to download the PDB-style file with coordinates for d6w9dd1.
(The format of our PDB-style files is described here.)

Timeline for d6w9dd1:

  • d6w9dd1 is new in SCOPe 2.07-stable