SCOPe 2.08: Species: Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]

Lineage for Species: Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
Superfamily d.15.1: Ubiquitin-like [54236] (11 families)
Family d.15.1.0: automated matches [191343] (1 protein)
not a true family
Protein automated matches [190233] (31 species)
not a true protein
Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] [383234] (35 PDB entries)

PDB entries in Species: Severe acute respiratory syndrome coronavirus 2 [TaxId: 2697049]:

Domain(s) for 6w9c:
1. Domain d6w9ca1: 6w9c A:3-61 [383284]
  Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
  automated match to d5tl6b1
  complexed with cl, zn
2. Domain d6w9cb1: 6w9c B:4-61 [383235]
  Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
  automated match to d5tl6b1
  complexed with cl, zn
3. Domain d6w9cc1: 6w9c C:4-61 [383254]
  Other proteins in same PDB: d6w9ca2, d6w9cb2, d6w9cc2
  automated match to d5tl6b1
  complexed with cl, zn
Domain(s) for 6wrh:
- Domain d6wrha1: 6wrh A:1-61 [385224]
  Other proteins in same PDB: d6wrha2, d6wrha3
  automated match to d4m0wa1
  complexed with cl, gol, po4, zn; mutant
Domain(s) for 6wzu:
- Domain d6wzua1: 6wzu A:1-61 [386399]
  Other proteins in same PDB: d6wzua2
  automated match to d5tl6b1
  complexed with cl, gol, po4, zn
Domain(s) for 6xa9:
1. Domain d6xa9a1: 6xa9 A:2-61 [388065]
  Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
  automated match to d5tl6b1
  complexed with gol, zn
2. Domain d6xa9c1: 6xa9 C:2-61 [388045]
  Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
  automated match to d5tl6b1
  complexed with gol, zn
3. Domain d6xa9e1: 6xa9 E:5-61 [388093]
  Other proteins in same PDB: d6xa9a2, d6xa9c2, d6xa9e2
  automated match to d5tl6b1
  complexed with gol, zn
Domain(s) for 6xaa:
- Domain d6xaaa1: 6xaa A:5-61 [388047]
  Other proteins in same PDB: d6xaaa2, d6xaab_
  automated match to d5tl6b1
  complexed with zn
Domain(s) for 6xg3:
- Domain d6xg3a1: 6xg3 A:2-61 [388387]
  Other proteins in same PDB: d6xg3a2
  automated match to d4m0wa1
  complexed with cl, po4, zn; mutant
Domain(s) for 6yva:
- Domain d6yvaa1: 6yva A:4-61 [385719]
  Other proteins in same PDB: d6yvaa2
  automated match to d4m0wa1
  complexed with zn
Domain(s) for 7cjd:
1. Domain d7cjda1: 7cjd A:6-61 [389946]
  Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
  automated match to d4m0wa1
  complexed with edo, zn; mutant
2. Domain d7cjdb1: 7cjd B:2-61 [389970]
  Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
  automated match to d4m0wa1
  complexed with edo, zn; mutant
3. Domain d7cjdc1: 7cjd C:3-61 [389961]
  Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
  automated match to d4m0wa1
  complexed with edo, zn; mutant
4. Domain d7cjdd1: 7cjd D:1-61 [389933]
  Other proteins in same PDB: d7cjda2, d7cjdb2, d7cjdc2, d7cjdd2
  automated match to d4m0wa1
  complexed with edo, zn; mutant
Domain(s) for 7cmd:
1. Domain d7cmda1: 7cmd A:1-61 [390001]
  Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
  automated match to d4m0wa1
  complexed with ttt, zn
2. Domain d7cmdb1: 7cmd B:1-61 [389991]
  Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
  automated match to d4m0wa1
  complexed with ttt, zn
3. Domain d7cmdc1: 7cmd C:1-61 [390096]
  Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
  automated match to d4m0wa1
  complexed with ttt, zn
4. Domain d7cmdd1: 7cmd D:1-61 [390025]
  Other proteins in same PDB: d7cmda2, d7cmda3, d7cmdb2, d7cmdb3, d7cmdc2, d7cmdc3, d7cmdd2, d7cmdd3
  automated match to d4m0wa1
  complexed with ttt, zn
Domain(s) for 7d47:
1. Domain d7d47a1: 7d47 A:3-61 [390099]
  Other proteins in same PDB: d7d47a2, d7d47b2
  automated match to d4m0wa1
  complexed with ca, zn
2. Domain d7d47b1: 7d47 B:4-61 [390089]
  Other proteins in same PDB: d7d47a2, d7d47b2
  automated match to d4m0wa1
  complexed with ca, zn
Domain(s) for 7d6h:
- Domain d7d6ha1: 7d6h A:1-62 [394515]
  Other proteins in same PDB: d7d6ha2
  automated match to d4m0wa1
  complexed with po4, zn; mutant
Domain(s) for 7d7k:
1. Domain d7d7ka1: 7d7k A:4-61 [403182]
  Other proteins in same PDB: d7d7ka2, d7d7kb2
  automated match to d4m0wa1
  complexed with cff, edo, so4, zn
2. Domain d7d7kb1: 7d7k B:4-61 [403285]
  Other proteins in same PDB: d7d7ka2, d7d7kb2
  automated match to d4m0wa1
  complexed with cff, edo, so4, zn
Domain(s) for 7d7l:
1. Domain d7d7la1: 7d7l A:4-61 [403208]
  Other proteins in same PDB: d7d7la2, d7d7lb2
  automated match to d4m0wa1
  complexed with cff, gol, gxu, so4, zn
2. Domain d7d7lb1: 7d7l B:4-61 [403214]
  Other proteins in same PDB: d7d7la2, d7d7lb2
  automated match to d4m0wa1
  complexed with cff, gol, gxu, so4, zn
Domain(s) for 7e35:
- Domain d7e35a1: 7e35 A:2-62 [401979]
  Other proteins in same PDB: d7e35a2, d7e35b1
  automated match to d4m0wa1
  complexed with gyx, zn; mutant
Domain(s) for 7jir:
- Domain d7jira1: 7jir A:2-61 [390284]
  Other proteins in same PDB: d7jira2
  automated match to d4m0wa1
  complexed with act, cl, mes, ttt, zn; mutant
Domain(s) for 7jit:
- Domain d7jita1: 7jit A:2-61 [390199]
  Other proteins in same PDB: d7jita2
  automated match to d4m0wa1
  complexed with act, cl, mes, y95, zn; mutant
Domain(s) for 7jiv:
- Domain d7jiva1: 7jiv A:4-61 [390228]
  Other proteins in same PDB: d7jiva2
  automated match to d4m0wa1
  complexed with act, cl, mes, vby, zn; mutant
Domain(s) for 7jiw:
- Domain d7jiwa1: 7jiw A:7-61 [390173]
  Other proteins in same PDB: d7jiwa2
  automated match to d5tl6b1
  complexed with cl, mes, vby, zn
Domain(s) for 7jn2:
- Domain d7jn2a1: 7jn2 A:4-61 [390275]
  Other proteins in same PDB: d7jn2a2
  automated match to d5tl6b1
  complexed with act, cl, unx, y41, zn
Domain(s) for 7jrn:
1. Domain d7jrna1: 7jrn A:1-61 [390294]
  Other proteins in same PDB: d7jrna2, d7jrnj2
  automated match to d5tl6b1
  complexed with so4, ttt, zn
2. Domain d7jrnj1: 7jrn J:1-61 [390298]
  Other proteins in same PDB: d7jrna2, d7jrnj2
  automated match to d5tl6b1
  complexed with so4, ttt, zn
Domain(s) for 7koj:
- Domain d7koja1: 7koj A:2-61 [394999]
  Other proteins in same PDB: d7koja2
  automated match to d4m0wa1
  complexed with act, cl, mes, unx, y94, zn; mutant
Domain(s) for 7kok:
- Domain d7koka1: 7kok A:2-61 [395074]
  Other proteins in same PDB: d7koka2
  automated match to d4m0wa1
  complexed with act, cl, mes, unx, y96, zn; mutant
Domain(s) for 7kol:
- Domain d7kola1: 7kol A:7-61 [394938]
  Other proteins in same PDB: d7kola2
  automated match to d5tl6b1
  complexed with cl, mes, y96, zn
Domain(s) for 7krx:
- Domain d7krxa1: 7krx A:5-61 [395125]
  Other proteins in same PDB: d7krxa2
  automated match to d4m0wa1
  complexed with act, cl, unx, y41, zn; mutant
Domain(s) for 7lbr:
1. Domain d7lbra1: 7lbr A:1-61 [399507]
  Other proteins in same PDB: d7lbra2, d7lbra3, d7lbrb2, d7lbrb3
  automated match to d5tl6b1
  complexed with gol, so4, xt7, zn
2. Domain d7lbrb1: 7lbr B:1-61 [399495]
  Other proteins in same PDB: d7lbra2, d7lbra3, d7lbrb2, d7lbrb3
  automated match to d5tl6b1
  complexed with gol, so4, xt7, zn
Domain(s) for 7lbs:
1. Domain d7lbsa1: 7lbs A:1-61 [399472]
  Other proteins in same PDB: d7lbsa2, d7lbsa3, d7lbsb2, d7lbsb3
  automated match to d5tl6b1
  complexed with bo3, gol, so4, xr8, zn
2. Domain d7lbsb1: 7lbs B:1-61 [399492]
  Other proteins in same PDB: d7lbsa2, d7lbsa3, d7lbsb2, d7lbsb3
  automated match to d5tl6b1
  complexed with bo3, gol, so4, xr8, zn
Domain(s) for 7llf:
1. Domain d7llfa1: 7llf A:1-61 [399948]
  Other proteins in same PDB: d7llfa2, d7llfa3, d7llfb2, d7llfb3
  automated match to d5tl6b1
  complexed with bo3, gol, so4, y54, zn
2. Domain d7llfb1: 7llf B:1-61 [399914]
  Other proteins in same PDB: d7llfa2, d7llfa3, d7llfb2, d7llfb3
  automated match to d5tl6b1
  complexed with bo3, gol, so4, y54, zn
Domain(s) for 7llz:
1. Domain d7llza1: 7llz A:1-61 [399908]
  Other proteins in same PDB: d7llza2, d7llza3, d7llzb2, d7llzb3
  automated match to d5tl6b1
  complexed with so4, y61, zn
2. Domain d7llzb1: 7llz B:1-61 [399820]
  Other proteins in same PDB: d7llza2, d7llza3, d7llzb2, d7llzb3
  automated match to d5tl6b1
  complexed with so4, y61, zn
Domain(s) for 7los:
1. Domain d7losa1: 7los A:1-61 [399864]
  Other proteins in same PDB: d7losa2, d7losa3, d7losb2, d7losb3
  automated match to d5tl6b1
  complexed with cl, so4, y97, zn
2. Domain d7losb1: 7los B:1-61 [399740]
  Other proteins in same PDB: d7losa2, d7losa3, d7losb2, d7losb3
  automated match to d5tl6b1
  complexed with cl, so4, y97, zn
Domain(s) for 7m1y:
1. Domain d7m1ya1: 7m1y A:2-61 [402369]
  Other proteins in same PDB: d7m1ya2, d7m1yb2
  automated match to d4m0wa1
  complexed with 9jt, cl, fmt, gol, iod, na, zn; mutant
2. Domain d7m1yb1: 7m1y B:3-61 [402363]
  Other proteins in same PDB: d7m1ya2, d7m1yb2
  automated match to d4m0wa1
  complexed with 9jt, cl, fmt, gol, iod, na, zn; mutant
Domain(s) for 7ofs:
- Domain d7ofsa1: 7ofs A:1-61 [403825]
  Other proteins in same PDB: d7ofsa2
  automated match to d5tl6b1
  complexed with cl, yrl, zn
Domain(s) for 7oft:
- Domain d7ofta1: 7oft A:1-61 [403820]
  Other proteins in same PDB: d7ofta2
  automated match to d5tl6b1
  complexed with cl, hba, zn
Domain(s) for 7qcg:
- Domain d7qcga1: 7qcg A:1-61 [422812]
  Other proteins in same PDB: d7qcga2
  automated match to d6wrha1
  complexed with cl, dzi, gol, po4, zn

Domain(s) for 7rbs:

Domain d7rbsg1: 7rbs G:2-61 [422155]
Other proteins in same PDB: d7rbsa2, d7rbsb2, d7rbsb3, d7rbsc2, d7rbsd2, d7rbsd3, d7rbse2, d7rbsf2, d7rbsf3, d7rbsg2, d7rbsh2, d7rbsh3, d7rbsi2, d7rbsj2, d7rbsj3
automated match to d6wrha1
complexed with zn; mutant

Domain d7rbsa1: 7rbs A:3-61 [422157]
Other proteins in same PDB: d7rbsa2, d7rbsb2, d7rbsb3, d7rbsc2, d7rbsd2, d7rbsd3, d7rbse2, d7rbsf2, d7rbsf3, d7rbsg2, d7rbsh2, d7rbsh3, d7rbsi2, d7rbsj2, d7rbsj3
automated match to d6wrha1
complexed with zn; mutant

Domain d7rbsi1: 7rbs I:2-61 [422196]
Other proteins in same PDB: d7rbsa2, d7rbsb2, d7rbsb3, d7rbsc2, d7rbsd2, d7rbsd3, d7rbse2, d7rbsf2, d7rbsf3, d7rbsg2, d7rbsh2, d7rbsh3, d7rbsi2, d7rbsj2, d7rbsj3
automated match to d6wrha1
complexed with zn; mutant

Domain d7rbse1: 7rbs E:2-61 [422229]
Other proteins in same PDB: d7rbsa2, d7rbsb2, d7rbsb3, d7rbsc2, d7rbsd2, d7rbsd3, d7rbse2, d7rbsf2, d7rbsf3, d7rbsg2, d7rbsh2, d7rbsh3, d7rbsi2, d7rbsj2, d7rbsj3
automated match to d6wrha1
complexed with zn; mutant

Domain d7rbsc1: 7rbs C:2-61 [422271]
Other proteins in same PDB: d7rbsa2, d7rbsb2, d7rbsb3, d7rbsc2, d7rbsd2, d7rbsd3, d7rbse2, d7rbsf2, d7rbsf3, d7rbsg2, d7rbsh2, d7rbsh3, d7rbsi2, d7rbsj2, d7rbsj3
automated match to d6wrha1
complexed with zn; mutant

Domain(s) for 7uv5:
- Domain d7uv5a1: 7uv5 A:4-61 [422906]
  Other proteins in same PDB: d7uv5a2, d7uv5b_, d7uv5c_
  automated match to d6wrha1
  complexed with edo, zn; mutant

More info for Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] from d.15.1.0 automated matches

Timeline for Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] from d.15.1.0 automated matches:

Species Severe acute respiratory syndrome coronavirus 2 [TaxId:2697049] from d.15.1.0 automated matches first appeared in SCOPe 2.07