Lineage for d1agfa2 (1agf A:1-181)

  1. Root: SCOP 1.63
  2. 251695Class d: Alpha and beta proteins (a+b) [53931] (224 folds)
  3. 255210Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 255211Superfamily d.19.1: MHC antigen-recognition domain [54452] (1 family) (S)
  5. 255212Family d.19.1.1: MHC antigen-recognition domain [54453] (10 proteins)
  6. 255238Protein MHC class I, alpha-1 and alpha-2 domains [54468] (19 species)
  7. 255304Species Human (Homo sapiens), HLA-B0801 [TaxId:9606] [54473] (6 PDB entries)
  8. 255307Domain d1agfa2: 1agf A:1-181 [38262]
    Other proteins in same PDB: d1agfa1, d1agfb_
    mutant

Details for d1agfa2

PDB Entry: 1agf (more details), 2.2 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkrykl-5r mutation)
PDB Compounds: (A:)

SCOP Domain Sequences for d1agfa2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1agfa2 d.19.1.1 (A:1-181) MHC class I, alpha-1 and alpha-2 domains {Human (Homo sapiens), HLA-B0801}
gshsmryfdtamsrpgrgeprfisvgyvddtqfvrfdsdaaspreeprapwieqegpeyw
drntqifktntqtdreslrnlrgyynqseagshtlqsmygcdvgpdgrllrghnqyaydg
kdyialnedlrswtaadtaaqitqrkweaarvaeqdraylegtcvewlrrylengkdtle
r

SCOP Domain Coordinates for d1agfa2:

Click to download the PDB-style file with coordinates for d1agfa2.
(The format of our PDB-style files is described here.)

Timeline for d1agfa2:

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Domains from same chain:
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d1agfa1
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Domains from other chains:
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d1agfb_