SCOPe 2.08: Domain d6qp1a1: 6qp1 A:3-398

Lineage for d6qp1a1 (6qp1 A:3-398)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (166 species)
   not a true protein

7. Species Staphylococcus hominis [TaxId:1290] [381817] (2 PDB entries)

8. Domain d6qp1a1: 6qp1 A:3-398 [381818]
   Other proteins in same PDB: d6qp1a2, d6qp1b2
   automated match to d4dq6a_
   complexed with lcs

Details for d6qp1a1

PDB Entry: 6qp1, 1.42 Å

PDB Description: crystal structure of the plp-bound c-s lyase in the external aldimine form from staphylococcus hominis complexed with an inhibitor, l- cycloserine.

PDB Compounds: (A:) aminotransferase

SCOPe Domain Sequences for d6qp1a1:

Sequence, based on SEQRES records:

>d6qp1a1 c.67.1.0 (A:3-398) automated matches {Staphylococcus hominis [TaxId: 1290]}
ynfdeiidrrytnamnvegykgylfgdadtsdlkdndelirmwvadmdfgtpevvlnair
erlnkkilgytnvfgseyyeafvswtkkrygftfsqehlvfshgivaglielvgyicdkd
dkalivtpsygpfkmacdknhistvysplinhhgyyeidfddvrkkveteniklcifanp
hnptgrvwseeelatlgqimkendvwlisdeihcdikrsgqshipfakavpdydkiittm
sqskafniaglmfsniiiqnesllktwnthhfgtenplsvvatqaayekgegwlqamnhy
lddnfnyladflekelphaefkipeatylawvdlsyyikekdidesmakffiknagviie
gaeqfvhnaeghiriniavprevmkkglqkikaalv

Sequence, based on observed residues (ATOM records):

>d6qp1a1 c.67.1.0 (A:3-398) automated matches {Staphylococcus hominis [TaxId: 1290]}
ynfdeiidrrytnamnvegykgyllirmwvadmdfgtpevvlnairerlnkkilgytnvf
gseyyeafvswtkkrygftfsqehlvfshgivaglielvgyicdkddkalivtpsygpfk
macdknhistvysplinhhgyyeidfddvrkkveteniklcifanphnptgrvwseeela
tlgqimkendvwlisdeihcdikrsgqshipfakavpdydkiittmsqskafniaglmfs
niiiqnesllktwnthhfgtenplsvvatqaayekgegwlqamnhylddnfnyladflek
elphaefkipeatylawvdlsyyikekdidesmakffiknagviiegaeqfvhnaeghir
iniavprevmkkglqkikaalv

Timeline for d6qp1a1:

• d6qp1a1 first appeared in SCOPe 2.07