SCOPe 2.06: Domain d2sebd2: 2seb D:122-236

Lineage for d2sebd2 (2seb D:122-236)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.6: Superantigen toxins, C-terminal domain [54334] (2 families)

5. Family d.15.6.1: Superantigen toxins, C-terminal domain [54335] (16 proteins)

6. Protein Staphylococcal enterotoxin B, SEB [54342] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [54343] (18 PDB entries)

8. Domain d2sebd2: 2seb D:122-236 [37781]
   Other proteins in same PDB: d2seba1, d2seba2, d2sebb1, d2sebb2, d2sebd1
   complexed with nag

Details for d2sebd2

PDB Entry: 2seb, 2.5 Å

PDB Description: x-ray crystal structure of hla-dr4 complexed with a peptide from human collagen ii

PDB Compounds: (D:) enterotoxin type b

SCOPe Domain Sequences for d2sebd2:

Sequence; same for both SEQRES and ATOM records:

>d2sebd2 d.15.6.1 (D:122-236) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus [TaxId: 1280]}
ngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnnsp
yetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievyltt

Timeline for d2sebd2:

• d2sebd2 first appeared (with stable ids) in SCOP 1.55
  
• d2sebd2 appears in SCOPe 2.05
  
• d2sebd2 appears in SCOPe 2.07
  
• d2sebd2 appears in the current release, SCOPe 2.08