SCOPe 2.07: Domain d1sbbd2: 1sbb D:122-239

Lineage for d1sbbd2 (1sbb D:122-239)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.6: Superantigen toxins, C-terminal domain [54334] (2 families)

5. Family d.15.6.1: Superantigen toxins, C-terminal domain [54335] (16 proteins)

6. Protein Staphylococcal enterotoxin B, SEB [54342] (1 species)

7. Species Staphylococcus aureus [TaxId:1280] [54343] (18 PDB entries)

8. Domain d1sbbd2: 1sbb D:122-239 [37780]
   Other proteins in same PDB: d1sbba1, d1sbba2, d1sbbb1, d1sbbc1, d1sbbc2, d1sbbd1

Details for d1sbbd2

PDB Entry: 1sbb, 2.4 Å

PDB Description: t-cell receptor beta chain complexed with superantigen seb

PDB Compounds: (D:) protein (staphylococcal enterotoxin b)

SCOPe Domain Sequences for d1sbbd2:

Sequence; same for both SEQRES and ATOM records:

>d1sbbd2 d.15.6.1 (D:122-239) Staphylococcal enterotoxin B, SEB {Staphylococcus aureus [TaxId: 1280]}
ngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnnsp
yetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttkkk

Timeline for d1sbbd2:

• d1sbbd2 first appeared (with stable ids) in SCOP 1.55
  
• d1sbbd2 appears in SCOPe 2.06
  
• d1sbbd2 appears in the current release, SCOPe 2.08