Lineage for d6k2oa1 (6k2o A:2-160)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2778274Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2778275Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (27 families) (S)
  5. 2780621Family b.29.1.0: automated matches [191363] (1 protein)
    not a true family
  6. 2780622Protein automated matches [190437] (70 species)
    not a true protein
  7. 2781279Species Rotavirus a [TaxId:28875] [277665] (11 PDB entries)
  8. 2781301Domain d6k2oa1: 6k2o A:2-160 [375617]
    Other proteins in same PDB: d6k2oa2
    automated match to d5jdba_
    complexed with fuc, na, nag

Details for d6k2oa1

PDB Entry: 6k2o (more details), 2.3 Å

PDB Description: structural basis of glycan recognition in globally predominant human p[8] rotavirus
PDB Compounds: (A:) Outer capsid protein VP4

SCOPe Domain Sequences for d6k2oa1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6k2oa1 b.29.1.0 (A:2-160) automated matches {Rotavirus a [TaxId: 28875]}
ldgpyqpttftppidywilinsntngvvyestnnsdfwtavvaiephvnpvdrqytvfge
nkqfnvrndsdkwkflemfrsssqnefynrrtltsdtklvgilkyggriwtfhgetprat
tdssntanlndisiiihsefyiiprsqeskcneyinngl

SCOPe Domain Coordinates for d6k2oa1:

Click to download the PDB-style file with coordinates for d6k2oa1.
(The format of our PDB-style files is described here.)

Timeline for d6k2oa1:

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d6k2oa2