Lineage for d5zd0a_ (5zd0 A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (296 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 3073250Domain d5zd0a_: 5zd0 A: [373312]
    automated match to d4k1rb_

Details for d5zd0a_

PDB Entry: 5zd0 (more details)

PDB Description: solution structure of human ubiquitin with three alanine mutations in living eukaryotic cells by in-cell nmr spectroscopy
PDB Compounds: (A:) Ubiquitin

SCOPe Domain Sequences for d5zd0a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5zd0a_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d5zd0a_:

Click to download the PDB-style file with coordinates for d5zd0a_.
(The format of our PDB-style files is described here.)

Timeline for d5zd0a_:

  • d5zd0a_ is new in SCOPe 2.07-stable