Lineage for d6i20c1 (6i20 C:181-308)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2970038Fold d.110: Profilin-like [55769] (10 superfamilies)
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. 2970344Superfamily d.110.3: PYP-like sensor domain (PAS domain) [55785] (8 families) (S)
    alpha-beta(2)-alpha(2)-beta(3)
  5. 2970628Family d.110.3.0: automated matches [191387] (1 protein)
    not a true family
  6. 2970629Protein automated matches [190492] (24 species)
    not a true protein
  7. 2970760Species Ochromonas danica [TaxId:2986] [369281] (6 PDB entries)
  8. 2970763Domain d6i20c1: 6i20 C:181-308 [369296]
    Other proteins in same PDB: d6i20a2, d6i20b2, d6i20b3, d6i20c2, d6i20c3, d6i20d2, d6i20d3
    automated match to d5dkla_
    complexed with act, cl, edo, fmn, mes

Details for d6i20c1

PDB Entry: 6i20 (more details), 1.37 Å

PDB Description: flavin analogue sheds light on light-oxygen-voltage domain mechanism
PDB Compounds: (C:) Aureochrome1-like protein

SCOPe Domain Sequences for d6i20c1:

Sequence; same for both SEQRES and ATOM records: (download)

>d6i20c1 d.110.3.0 (C:181-308) automated matches {Ochromonas danica [TaxId: 2986]}
dyslvkalqtaqqnfvisdpsipdnpivyasqgfltltgyalsevlgrncrflqgpetdp
kavekvrkglergedttvvllnyrkdgstfwnqlfiaalrdgegnvvnylgvqckvsedy
akaflkne

SCOPe Domain Coordinates for d6i20c1:

Click to download the PDB-style file with coordinates for d6i20c1.
(The format of our PDB-style files is described here.)

Timeline for d6i20c1:

  • d6i20c1 first appeared in SCOPe 2.07, called d6i20c_