Lineage for d6nm6l2 (6nm6 L:109-210)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2348364Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 2352435Protein automated matches [190374] (16 species)
    not a true protein
  7. 2352460Species Human (Homo sapiens) [TaxId:9606] [187221] (925 PDB entries)
  8. 3065500Domain d6nm6l2: 6nm6 L:109-210 [365562]
    Other proteins in same PDB: d6nm6d_, d6nm6e_, d6nm6l1, d6nm6u_, d6nm6v_
    automated match to d1jvka2
    complexed with bma, man, nag

Details for d6nm6l2

PDB Entry: 6nm6 (more details), 2.74 Å

PDB Description: crystal structure of hiv-1 bg505 sosip.664 prefusion env trimer bound to n6 fr3-03 scfv in complex with crystallization chaperones 3h109l fab and 35o22 scfv at 3.2 angstrom
PDB Compounds: (L:) 3H109L Fab light chain

SCOPe Domain Sequences for d6nm6l2:

Sequence; same for both SEQRES and ATOM records: (download)

>d6nm6l2 b.1.1.2 (L:109-210) automated matches {Human (Homo sapiens) [TaxId: 9606]}
qpkaapsvtlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskq
snnkyaassylsltpmqwkmhksyscqvthegstvektvapt

SCOPe Domain Coordinates for d6nm6l2:

Click to download the PDB-style file with coordinates for d6nm6l2.
(The format of our PDB-style files is described here.)

Timeline for d6nm6l2:

  • d6nm6l2 appears in periodic updates to SCOPe 2.07 starting on 2019-02-28