Lineage for d5z16b_ (5z16 B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2479470Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
    consists of two intertwined (sub)domains related by pseudo dyad; duplication
    3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest
  4. 2479471Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families) (S)
    the constituent families form similar dimers
  5. 2479770Family c.77.1.2: Monomeric isocitrate dehydrogenase [82526] (2 proteins)
    the active site is contained within one subunit between the canonical ICDH fold and a large insert domain that itself is a probable rudiment form of ICDH fold resulted from duplication, domain swapping and deletion
    automatically mapped to Pfam PF03971
  6. 2479777Protein automated matches [190493] (6 species)
    not a true protein
  7. 3065153Species Acinetobacter baumannii [TaxId:470] [365215] (1 PDB entry)
  8. 3065156Domain d5z16b_: 5z16 B: [365218]
    automated match to d5kvua_
    complexed with mg, po4

Details for d5z16b_

PDB Entry: 5z16 (more details), 3 Å

PDB Description: a novel dimeric isocitrate dehydrogenase from acinetobacter baumannii
PDB Compounds: (B:) isocitrate dehydrogenase

SCOPe Domain Sequences for d5z16b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5z16b_ c.77.1.2 (B:) automated matches {Acinetobacter baumannii [TaxId: 470]}
stiiytltdeapllatysllpiietftkpagieivksdisvaarvlaefadylseeqkvs
dnlaelgrltqdpdtniiklpnisasvaqltacikelqskgyaipdypenpateeektik
arygkclgsavnpvlregnsdrrapaavknyakkhphsmsewkqwsqthvshmeegdfyh
geksmtldrprnvkmelitnsgksivlkpkvalqegeiidsmfmskkalcdfyekqlddc
reagilfslhvkatmmkvshpivfghcvkiyykeafekhgklfdelginvnngmaglyek
ietlptslreeiiedlhacqehrpalamvdsakgitnfhspndiivdasmpamiraggkm
wgadgkqydakavmpestfariyqeminfckwhgnfdpktmgtvpnvglmaqkaeeygsh
dktfeipeagianitdldtgevlltqnveegdiwrmcqvkdapirdwvklavtrarnsgm
paifwldpyrphenelikkvqkylkdhdttgldiqimsqvramrytlervvrgldtisvt
gnilrdyltdlfpimelgtsakmlsivplmagggmyetgaggsapkhvqqlveenhlrwd
slgeflalavsleemgikennartkllaktldeatgklldndkspsrrtgeldnrgshfy
lslywaealaaqnedaelkakfaplakalaeneqkivaelaqvqgkpadiggyyavdpak
vsavmrpsatfnaalstvq

SCOPe Domain Coordinates for d5z16b_:

Click to download the PDB-style file with coordinates for d5z16b_.
(The format of our PDB-style files is described here.)

Timeline for d5z16b_:

  • d5z16b_ appears in periodic updates to SCOPe 2.07 starting on 2019-02-21