SCOPe 2.07: Domain d6dgfa_: 6dgf A:

Lineage for d6dgfa_ (6dgf A:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.9: Ubiquitin carboxyl-terminal hydrolase, UCH [82568] (6 proteins)
   Pfam PF00443

6. Protein automated matches [191167] (1 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [189384] (6 PDB entries)

8. Domain d6dgfa_: 6dgf A: [364859]
   Other proteins in same PDB: d6dgfb1, d6dgfb2
   automated match to d3nhea_
   complexed with so4, zn

Details for d6dgfa_

PDB Entry: 6dgf, 2.34 Å

PDB Description: ubiquitin variant bound to usp2

PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase 2

SCOPe Domain Sequences for d6dgfa_:

Sequence, based on SEQRES records:

>d6dgfa_ d.3.1.9 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aqglaglrnlgntcfmnsilqclsntrelrdyclqrlymrdlhhgsnahtalveefakli
qtiwtsspndvvspsefktqiqryaprfvgynqqdaqeflrflldglhnevnrvtlrpks
npenldhlpddekgrqmwrkyleredsrigdlfvgqlkssltctdcgycstvfdpfwdls
lpiakrgypevtlmdcmrlftkedvldgdekptccrcrgrkrcikkfsiqrfpkilvlhl
krfsesrirtsklttfvnfplrdldlrefasentnhavynlyavsnhsgttmgghytayc
rspgtgewhtfndssvtpmsssqvrtsdayllfyelasppsrm

Sequence, based on observed residues (ATOM records):

>d6dgfa_ d.3.1.9 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
aqglaglrnlgntcfmnsilqclsntrelrdyclqrlymrdlhhgsnahtalveefakli
qtiwtsspndvvspsefktqiqryaprfvgynqqdaqeflrflldglhnevnrvdhlpdd
ekgrqmwrkyleredsrigdlfvgqlkssltctdcgycstvfdpfwdlslpiakypevtl
mdcmrlftkedvldgdekptccrcrgrkrcikkfsiqrfpkilvlhlkrfsesrirtskl
ttfvnfplrdldlrefasentnhavynlyavsnhsgttmgghytaycrspgtgewhtfnd
ssvtpmsssqvrtsdayllfyelasppsrm

Timeline for d6dgfa_:

• d6dgfa_ is new in SCOPe 2.07-stable