Lineage for d6huqn_ (6huq N:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548740Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
    4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing
  4. 2548741Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families) (S)
    N-terminal residue provides two catalytic groups, nucleophile and proton donor
  5. 2548925Family d.153.1.4: Proteasome subunits [56251] (4 proteins)
  6. 2549037Protein Proteasome alpha subunit (non-catalytic) [56255] (9 species)
    contains an extension to the common fold at the N-terminus
  7. 2549053Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (235 PDB entries)
    The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8)
  8. 3063876Domain d6huqn_: 6huq N: [363938]
    Other proteins in same PDB: d6huqa_, d6huqb_, d6huqc_, d6huqd_, d6huqf_, d6huqg_, d6huqh_, d6huqm_, d6huqp_, d6huqq_, d6huqr_, d6huqt_, d6huqu_, d6huqv_
    automated match to d4j70n_
    complexed with cl, gt5, mg, so4

Details for d6huqn_

PDB Entry: 6huq (more details), 3 Å

PDB Description: yeast 20s proteasome with human beta2c (s171g) in complex with 20
PDB Compounds: (N:) Proteasome subunit beta type-1

SCOPe Domain Sequences for d6huqn_:

Sequence; same for both SEQRES and ATOM records: (download)

>d6huqn_ d.153.1.4 (N:) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
tsimavtfkdgvilgadsrtttgayianrvtdkltrvhdkiwccrsgsaadtqaiadivq
yhlelytsqygtpstetaasvfkelcyenkdnltagiivagyddknkgevytiplggsvh
klpyaiagsgstfiygycdknfrenmskeetvdfikhslsqaikwdgssggvirmvvlta
agverlifypdeyeql

SCOPe Domain Coordinates for d6huqn_:

Click to download the PDB-style file with coordinates for d6huqn_.
(The format of our PDB-style files is described here.)

Timeline for d6huqn_:

  • d6huqn_ appears in periodic updates to SCOPe 2.07 starting on 2019-02-09