SCOPe 2.08: Domain d6hvad_: 6hva D:

Lineage for d6hvad_ (6hva D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein automated matches [190144] (14 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:559292] [189752] (202 PDB entries)

8. Domain d6hvad_: 6hva D: [363758]
   Other proteins in same PDB: d6hvac2, d6hvae_, d6hvag_, d6hvai_, d6hvaj_, d6hvak_, d6hval_, d6hvan_, d6hvao_, d6hvaq2, d6hvas_, d6hvau_, d6hvaw_, d6hvax_, d6hvay_, d6hvaz_
   automated match to d1rype_
   complexed with cl, gqt, mg

Details for d6hvad_

PDB Entry: 6hva, 2.9 Å

PDB Description: yeast 20s proteasome with human beta2i (1-53) in complex with 13

PDB Compounds: (D:) Proteasome subunit alpha type-5

SCOPe Domain Sequences for d6hvad_:

Sequence, based on SEQRES records:

>d6hvad_ d.153.1.4 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgegas
geerlmsrpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewh
ssltlkeaellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekea
ae

Sequence, based on observed residues (ATOM records):

>d6hvad_ d.153.1.4 (D:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]}
drgvstfspegrlfqveysleaiklgstaigiatkegvvlgvekratspllesdsiekiv
eidrhigcamsgltadarsmiehartaavthnlyydedinvesltqsvcdlalrfgelms
rpfgvalliaghdaddgyqlfhaepsgtfyrynakaigsgsegaqaellnewhssltlke
aellvlkilkqvmeekldennaqlscitkqdgfkiydnektaelikelkekeaae

Timeline for d6hvad_:

• d6hvad_ first appeared in SCOPe 2.07